Gene Spea_2323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2323 
Symbol 
ID5662716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2829873 
End bp2830535 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID641236933 
ProductGntR family transcriptional regulator 
Protein accessionYP_001502178 
Protein GI157962144 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.474326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTT TTAACGAACA GCCTGTTACC AGTGCCGATA AGACCTTTTT CCAGCTACGT 
AAAGCTATCG TAGAGGGCGA GGTTTTGCAG GGCTCAAAGT TAAGTGAAAC TGAGTTGTCG 
ACAAAATATG CCGTTAGTCG AGCGGTGATC CGTGAGGCGA TTAATCGTTT AGAGGCTAGT 
CACTTAGTTG AGCGTAAAGC CAATGTTGGC GCAAGGGTGG TGAGCCTTAC CGCCGAAGGG 
CTCGTTGAGC TTTATCAGGT GAGAGAGTCT CTGGAGGGCA TGGCGGCAAG GCTTGCCGCA 
ATAAATATGA CCGATCAAGA GATCACTGAT CTACAAGCCT TGCTCAACAG TCACTTTGAA 
AAGGTCCAAT CGGCAGGCTC TTATTACCAG GAAGCAGGTG ATGTGGACTT TCACTATCGC 
ATCATTCAAG GCAGTAAAAA CAAACACCTT ATCTCTATGC TGTTTGACGG CATATATCAC 
CTAGTGCGTA TGTACCGCGT ACAGCTAGGG ATGACGGGGC CACGAGTGAC TACCGCCTTC 
GATGAGCATA AACACATAGT ACAAGCGATT TGTAATCGTG ATGCAGAACT CGCAGAGATG 
CTGATGCGTC GCCATATTTT GTACTCAAAA TCTAGTATTC AAAACAAGCT AGCTAATGAT 
TAA
 
Protein sequence
MTFFNEQPVT SADKTFFQLR KAIVEGEVLQ GSKLSETELS TKYAVSRAVI REAINRLEAS 
HLVERKANVG ARVVSLTAEG LVELYQVRES LEGMAARLAA INMTDQEITD LQALLNSHFE 
KVQSAGSYYQ EAGDVDFHYR IIQGSKNKHL ISMLFDGIYH LVRMYRVQLG MTGPRVTTAF 
DEHKHIVQAI CNRDAELAEM LMRRHILYSK SSIQNKLAND