| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2246 |
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| Symbol | |
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| ID | 5662639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2723827 |
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| End bp | 2725005 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236850 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_001502101 |
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| Protein GI | 157962067 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.420353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAACG CAACAACGAA TGCTGAAACA GTCCATCGCG TGAGCTTTTT AGATAAAGAC
TCACTCGCGA TCCCCATTTT AAAAATTCTC CAAGCGGACG GTACCGCTTA TGAAGAGGCC
GTATTACCCG TTATCGATGA AGCTTTAGCG GCTAAAATCC ATGATACCTG CGTATTTACC
CGTGTATTAG ACGAGCGTAT GTTGGGGGCG CAGCGTCAAG GTCGTATTAG CTTTTATATG
ACCTGTACTG GTGAAGAGGC GTCGATAATA GGCAGCACTG CAGCACTCGA TGATGGTGAT
GTGATCTTGG CTCAGTACCG TGAACATGCT GCGATTCGTT ACCGCGGATT TACCACTGAG
CAGTTTATGA ATCAGATGTT CAGTAATGAA AAAGATTTTG GCAAGGGCCG CCAGATGCCG
ATCCATTACG GCAGTGAAGC GCTTAACTAT CAAACTATTT CATCTCCGCT TGCCACACAG
ATCCCTCAAG CTACAGGTGT TGCATATAGC CTAAAAATGC AGGGTAAGCG TAATGTAGCA
ATCTGTTATT TTGGTGAAGG CGCAGCCTCA GAAGGCGATT TTCACGCCGG TCTAAATATG
GCAGCAGTGC TCAATTCTCC AGTTATTTTC TTTTGCCGTA ATAACGGTTA CGCCATCTCA
ACACCTACTG ATGAACAGTT TAAAGGTAAC GGTATTGCTA GCCGCGGTGT GGGCTATGGC
ATGCATACCA TTCGTGTCGA TGGTAACGAC ATGTTGGCAG TATTAGCGGC AACTCAACAG
GCTCGCGCCT ATGCGTTAGA CAATAATGCC CCTGTTTTGA TTGAAGCCAT GACTTATCGA
TTAGGTGCTC ATTCATCATC TGATGATCCT TCTGGCTATC GCTCGAAAGA TGAAGAGGCA
AAATGGCAGC AGCATGATCC AGTTAAACGT TTCAAGCTAT GGATGATCAA TAAGGGCTGG
ATGAATGAGC AGCGCGATGC CGATCTCTAT GTTAAGTACC GTGAAGAGGT GCTATCTGAG
CTTAAGGTTG CTGAAAAAAT TCCAACTCCT CATATCGATA ACATTATCGA AGATGTATAT
GACACACCAA CCCCAATTCT GAAGAAGCAG CTAGCTGACT TAAAAAACCA TGTTAAGAAG
TATCCAGAAT CGTATCCAAA AAGTGCAGGG AGAGTATAA
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| Protein sequence | MSNATTNAET VHRVSFLDKD SLAIPILKIL QADGTAYEEA VLPVIDEALA AKIHDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEASII GSTAALDDGD VILAQYREHA AIRYRGFTTE
QFMNQMFSNE KDFGKGRQMP IHYGSEALNY QTISSPLATQ IPQATGVAYS LKMQGKRNVA
ICYFGEGAAS EGDFHAGLNM AAVLNSPVIF FCRNNGYAIS TPTDEQFKGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAYALDNNA PVLIEAMTYR LGAHSSSDDP SGYRSKDEEA
KWQQHDPVKR FKLWMINKGW MNEQRDADLY VKYREEVLSE LKVAEKIPTP HIDNIIEDVY
DTPTPILKKQ LADLKNHVKK YPESYPKSAG RV
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