| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2232 |
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| Symbol | |
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| ID | 5662625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2704167 |
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| End bp | 2704793 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641236835 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_001502087 |
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| Protein GI | 157962053 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000470092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA TTTTCACGAT AGCAGCCTTG AGTCTGCCAT TGTTTTGCCA CCTTCCAGCT
ATGGCTGGAG GGCAGGATGA TTTAAAAGTA AAGCTAATGG AAATTAACAC CTTAAAAGCG
AACTTTAATC AAACTGTGAC AGATATAAAT CAAAAAGTTA TTCAAACAGG CGAGGGCGTA
TTCGCACTTT CACACCCTAA CCAGTTTTAT TGGCATCTGA CTGCACCCGA TGAGTCATTG
ATCGTTGCCG ATGGCACGGA TGTGTGGATC TATAATCCAT TTGCAGAAGA AGTCTCTGTT
ATGGATATAA ATCAGGCCAT CAATGCATCT CCTATCGCTT TATTAGTTCA TTCCGATGAC
GCCACATGGT CGCAATATGA TGTGGTAAAT AACGGCGACT GTTTTGATAT TAGCCCCAGA
GATAAAGATA GCGGCGTATC GGAAGTTGAG GTTTGCTTCA ACCAACAGCA ATTGACTAAA
ATGGTCTTAA AAGATCAACA GGGTAATACC AGTGATTTTA CCCTGACGAA TCAAACTCCT
ATTGCAGAGA ATGACAAAGA TCTGTTTAAG TTTATCGTAC CTGATGATGT CGATATCGAT
GATCAGCGTT TAAAATCGCA AAATTAA
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| Protein sequence | MKKIFTIAAL SLPLFCHLPA MAGGQDDLKV KLMEINTLKA NFNQTVTDIN QKVIQTGEGV
FALSHPNQFY WHLTAPDESL IVADGTDVWI YNPFAEEVSV MDINQAINAS PIALLVHSDD
ATWSQYDVVN NGDCFDISPR DKDSGVSEVE VCFNQQQLTK MVLKDQQGNT SDFTLTNQTP
IAENDKDLFK FIVPDDVDID DQRLKSQN
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