| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2180 |
|---|
| Symbol | |
|---|
| ID | 5662573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2639909 |
|---|
| End bp | 2640829 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641236783 |
|---|
| Product | putative manganese-dependent inorganic pyrophosphatase |
|---|
| Protein accession | YP_001502035 |
|---|
| Protein GI | 157962001 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTT ATGTTGTGGG CCACAAAATC CCAGACTCAG ATTCAATTTG TGGTGCTATT
GCACTTGCAC ACCTAAAAAA CCAGATCGGT GAAGCGTCTG TTGCGACTCG TTTAGGTGAT
ATTTCACCTG AGACTGCATT CATTCTTGAT AAGTTTGGTT TCGAAGCGCC TGAGCTTAAG
CTTAGTTATG CTGGCGAAGA AGTTTACATT GTTGACCATT CAGAACTGAC TCAAGCACCT
GACGACATCG CAGAAGCGAC AATTGTTGGT ATTGTTGATC ACCATAAACT GGGCGATCTA
ACAACTTCAA CGCCACTAGA GTGCTGGATC CGTCCAGTAG GTTGTAGTAA TACCGTCATC
AAGATGATGT ATGACTTCTA CAATGTTGAG ATCCCAAAGA ATATCGCTGG CATTATGCTT
TGCGCTATTT TAAGTGACAC GGTTATTTTC AAGTCGCCAA CTTGTACTAC AGCCGATATT
AAGTGCGTAG AAGCACTTGC TGAAATTGCT GGCATCGAAG ACTTTAAAGC CTTAGGCATG
GATATGTTTA AAGTGAAGTC TGCGGTTGAA GGCACTCCTG CACGTGACCT TGTTATGCGT
GACTTTAAAG ACTTCAACAT GAACGGTAAC CTAGTGGGTA TTGGTCAGTT AGAAGTGATC
GATCTTTCAG TATTCGATGA CATTAAAGCG GATCTAGAAG CGGATATTGC GGCGCTTAAA
GCAGAAGGCA ATCGTCACAG CGTACTATTG CTACTGACTG ACATCATGAA GGAAGGTTCA
GAAATGCTAA TCGTCACTGA CGATCTAGCT AAAGTTGAAT CGGCATACAA CTGCAAGTCA
GTAGATAACA AAGTTTGGTT AGATGGTGTA CTAAGCCGTA AGAAGCAAGT TGTACCACCA
CTACAGGATG CTTTCGCTTA A
|
|---|
| Protein sequence | MPVYVVGHKI PDSDSICGAI ALAHLKNQIG EASVATRLGD ISPETAFILD KFGFEAPELK
LSYAGEEVYI VDHSELTQAP DDIAEATIVG IVDHHKLGDL TTSTPLECWI RPVGCSNTVI
KMMYDFYNVE IPKNIAGIML CAILSDTVIF KSPTCTTADI KCVEALAEIA GIEDFKALGM
DMFKVKSAVE GTPARDLVMR DFKDFNMNGN LVGIGQLEVI DLSVFDDIKA DLEADIAALK
AEGNRHSVLL LLTDIMKEGS EMLIVTDDLA KVESAYNCKS VDNKVWLDGV LSRKKQVVPP
LQDAFA
|
|---|
| |