| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2113 |
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| Symbol | |
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| ID | 5662506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2556685 |
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| End bp | 2557929 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641236715 |
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| Product | inner membrane transport protein YdhC |
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| Protein accession | YP_001501968 |
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| Protein GI | 157961934 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0214399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAC TAACAAGTGT AAAATACTAT ATTTTTCTAG CATATCTAGC GGTATTGAGC
ATGTTAGGCT TTATTGCCAC TGACATGTAC TTGCCTGCAT TCAAAGCAAT TGAAGACACA
ATGGCAACAT CGCCATCACA AGTCGCAATG TCTTTGACAT TCTTTTTAGC CGGCTTAGCG
CTAGGTCAGT TACTTTATGG TCCTTTAGTT GAGCGTTTTG GTAAACGTAA TTCACTGATC
TTAGGTCTAG TATTGTTTGC TGCTGCAAGC TTCTCGATAT CCGTTAGTGA TTCAATTTTA
GTATTTAATA TTTCGCGTTT TATACAAGCA TTAGGTGCAT GTTCTGCCGG CGTTATTTGG
CAGGCGATTG TTATTGAAAA ATACGATGCA GCAAAAGCAC AGGGCGTATT TTCTAATATT
ATGCCGTTAG TGGCCTTGTC ACCAGCACTT GCTCCAATCT TAGGTGCGTT TATCTTACAA
TCGTTAGGTT GGCAGAGCAT TTTCATTACA TTGACCGGTA TGGCTGCTGT AATGATTCTT
TTGACAGTTT GGTTTGTGCC TGCAGAAACC AAAGCAATAA GCCATGAAAA GAAAGAGATC
AGCTATTTAA CAATCCTTAA GAACACTAAA TACCTAGGCA ACGTGGTTAT TTTTGGTGCT
TGTTCTGGTG CGTTTTTCTC ATACCTAACA CTGTGGCCAG TAGTGATGGA GCAGCATGGA
TTCGATGCTA CAGCAATTGG GCTGAGCTTT ATTCCGCAAA CTATTACCTT TATTTTGGGT
GGCTATGCGA GTAAAACGCT TATTCGTAAA ATCGGTTCAG AGAAAACCTT AAAGCTATTA
CTATCTGTAT TTGGCACGTG TGCTATGTCT ATTGCAGTAG TGACAATCTT ACTGCAAGGA
CTATCAATTT ATCCATTGCT AGCTATATTC TCTGTACTTG CAGCGTGTAG TGGTGGTATT
TACCCAATTG TTGTAAACGG TGCATTGCAG GAATTCTCTG ATAACGCAGC TAAAGCGGCG
GGTTTACAGA ACTTCCTACA GATCAGCTTA TCATTTGGTG CTTCAAGCCT TGTAGCTATG
TGGGCGACAA GTGGTGAAGT TGCGATAGGT TGGGGGATTA TGATCTGCTC ATTCATCGTA
TTTATTGGCT TCAAACTACG TAACTATAAA AATTGGAATG AGGTTAGCGA AGAGATCGTA
ATGCCAGATC CTGCGCGCAT TGCAATCAAT CAGGATGAGA AATAA
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| Protein sequence | MNSLTSVKYY IFLAYLAVLS MLGFIATDMY LPAFKAIEDT MATSPSQVAM SLTFFLAGLA
LGQLLYGPLV ERFGKRNSLI LGLVLFAAAS FSISVSDSIL VFNISRFIQA LGACSAGVIW
QAIVIEKYDA AKAQGVFSNI MPLVALSPAL APILGAFILQ SLGWQSIFIT LTGMAAVMIL
LTVWFVPAET KAISHEKKEI SYLTILKNTK YLGNVVIFGA CSGAFFSYLT LWPVVMEQHG
FDATAIGLSF IPQTITFILG GYASKTLIRK IGSEKTLKLL LSVFGTCAMS IAVVTILLQG
LSIYPLLAIF SVLAACSGGI YPIVVNGALQ EFSDNAAKAA GLQNFLQISL SFGASSLVAM
WATSGEVAIG WGIMICSFIV FIGFKLRNYK NWNEVSEEIV MPDPARIAIN QDEK
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