| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2082 |
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| Symbol | |
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| ID | 5662475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2522377 |
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| End bp | 2523774 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236677 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001501937 |
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| Protein GI | 157961903 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTTG TAACCCCAGT GCTGGCTAAT GATTACTTAA CTAACATAGT CAAAATAATT
GAACCTAAGA CTTCTCAAAC AGCCATAATT GTCAGCCCTC TTGATAACAA TGCCAAAGAT
TTAAAGGCTG ATGTAGGATT TCGTAAGGAC GCAGAGCGTC TATTTGTCCC TGCTAGTACA
ATGAAGTTGT TAACAGCCGT TGCAGCAACC AAGGCATTAG GCAGGGACTT TAGCTTTACA
ACACAGATAG ATTCTTTTGT CGGGATTAAA AACAATCGTA TTGAGGGAGA TTTATTCCTC
AGGTTCGATG GCGATCCAAC ACTTACAACA AACGATCTAA GACAGTTATT TAAGCTGCTT
CAGAAACAAG GCTTAAAACA TATCGAGGGG AATCTCTATT TAGTTGGCGA TCAGCAAGAG
ACTCTACAGG CACCTGGTTG GGTTTGGGAT GACTTGGGGA TCTGTTATGC TGCGCCAGTT
TCCCGCTATA TCCTTAATCA AAACTGTGTA AAAGCCAAGT TAGCACCAAC CCTTGCCGAT
AATCAGTCAA AATTGACATT TAGCCAATTC GAACCCATTT CCATCACAAA TACTGCTGTT
TTCGACAAAG TCGATGACAT TCCTTTTTGC GAATTAAGCT TACAACGTCA CTCTAATAAT
CAGTTTGCGT TATCGGGTTG CTACGCTGGC CAAAAACCGT TAAAACTCTC GATAGCCATC
TCTGACCCAG CCCTTTATGC GCAAAATAGC CTAACGAATA TGCTGGAGAA CTTAGGGATC
AGTATCAACG GCAATGTACT GCTAACCAGT AAAAGACCTG CCAATACATT GTTGCTTGCG
CAGCACAAAT CTAAGCCCCT TTCCGATCTG ACTGATACCA TGTTGTTAAA ATCAGATAAC
TTAATCGCAG ACAGCCTGCT AAAGCGTCTA GGGCAGCATA TTTACGGAGT GCCGGGCTCC
TTTATTAACG GAAGCACGGC AATGAAGCAG ATCTTAACCG ATCAAGGCAT CGATCTATCC
AGTGCCAATA TCGTCGATGG TTCTGGTTTA TCTCGTTATA ACCTACTCAG CGCCCAGCAA
CTTAGCCAAG TACTGCTACT TATCAAACAA GATAAACAAC TTAACTTCTT AATCGATCAA
CTGCCTATCG CAGGTAAAAC TGGGACACTA GCTTATCGTA GTGGCTACAC AAGCTTGCCT
CTTAAAGGAA TTGTGTTGGC AAAAACAGGC TCAATGATGG GAGTGGCGAA TTTAGCGGGC
TTTATTAAAC AAGATGGACA ATTAACCCAA GCGTTTGTGA TCTTAGAAAA TGGACATAGT
CCTTCGGTCA AAAAAACCGA AGTCGCACCT TTTAACGTGT TATTTTTACA GTCTATGCTT
CAAAAAAGTC AACCCTAG
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| Protein sequence | MLFVTPVLAN DYLTNIVKII EPKTSQTAII VSPLDNNAKD LKADVGFRKD AERLFVPAST
MKLLTAVAAT KALGRDFSFT TQIDSFVGIK NNRIEGDLFL RFDGDPTLTT NDLRQLFKLL
QKQGLKHIEG NLYLVGDQQE TLQAPGWVWD DLGICYAAPV SRYILNQNCV KAKLAPTLAD
NQSKLTFSQF EPISITNTAV FDKVDDIPFC ELSLQRHSNN QFALSGCYAG QKPLKLSIAI
SDPALYAQNS LTNMLENLGI SINGNVLLTS KRPANTLLLA QHKSKPLSDL TDTMLLKSDN
LIADSLLKRL GQHIYGVPGS FINGSTAMKQ ILTDQGIDLS SANIVDGSGL SRYNLLSAQQ
LSQVLLLIKQ DKQLNFLIDQ LPIAGKTGTL AYRSGYTSLP LKGIVLAKTG SMMGVANLAG
FIKQDGQLTQ AFVILENGHS PSVKKTEVAP FNVLFLQSML QKSQP
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