Gene Spea_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2060 
Symbol 
ID5662453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2492212 
End bp2492955 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content35% 
IMG OID641236655 
Producthypothetical protein 
Protein accessionYP_001501915 
Protein GI157961881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.528414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAGG TAGACCCTTA TTACCTAGAG GTTTACATTG CTGCATATCA CAAACGCGGT 
TCAACACACA GTGAAAAGCT TGAAATCATA AGCGAGTTGC GAAAATTTAA CACAGAAAGA 
ACGCAACTAT TCTTCCAAAA ATTGAATAGC TCTGAAAGAA ATAATCACAT TAGAAATATC 
GCATTTAAAC ATCTACAAGA ACTAGGTGCT TTTGTTCGCA AACGTAAAGG GTTTAAAGGT 
AAGAAAAAAC AATACCACTT GGAAAAAGTC AATTTTGAAG TAACACCCCA GGACCTAGCC 
AAGCTCCTTA GTTCAAATAG CTTACAGAGT AAGAAAACCT TTGATTGTTT TGTATCACAT 
AGCTATAAAG ATAGTCTGCT AATTAGTGAC TTGAAACAAC AACTGAACAA GCATGACATT 
CATATTTACT ATGATTGGAG TAGCGATAAT GATTTTTTAA AACGAGAGCT TACGAGTGAG 
TTCACCAAAA TTGTGCTTAA AGAAAGAATC AAACAATCGC GTAGATTTCT CTTTGTCCAG 
ACCAATAATT CTGTGTCTGA AAGACTCGAA GTTAAGTCTC TTTGGGTACA AATGGAACTA 
GATTACGCCG TTGAAATTGG TAAAGAAATA CACTGCTTAA ATTTGACTGA ATTTCCATCT 
CTTTTTAGTG CGCTAGAGCT TCAAAACGAT AACACAGAGC TAACTAAAAG TTCTGTAAGC 
TTCATTAAAA CTTCTATCAA ATAA
 
Protein sequence
MQEVDPYYLE VYIAAYHKRG STHSEKLEII SELRKFNTER TQLFFQKLNS SERNNHIRNI 
AFKHLQELGA FVRKRKGFKG KKKQYHLEKV NFEVTPQDLA KLLSSNSLQS KKTFDCFVSH 
SYKDSLLISD LKQQLNKHDI HIYYDWSSDN DFLKRELTSE FTKIVLKERI KQSRRFLFVQ 
TNNSVSERLE VKSLWVQMEL DYAVEIGKEI HCLNLTEFPS LFSALELQND NTELTKSSVS 
FIKTSIK