| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1990 |
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| Symbol | |
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| ID | 5662383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2414614 |
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| End bp | 2415192 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641236585 |
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| Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
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| Protein accession | YP_001501845 |
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| Protein GI | 157961811 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAG CTGCAGCGGA TGATGGTATC AATATTCAGA TCTGCTCTGC TTATCGAGAC
TTCGATAAGC AGCAGTCTAT CTGGAACGCT AAGGCCAGTG GTAAAAGGGT TCTGTTAAAC
AAAGAATCTC AACCTGTTTC CATAGAATCA CTGTCTTCAA GTAGTTTGAT TGATTTAATA
CTTATCTGGT CTGCTATACC CGGCATGTCT CGCCACCACT GGGGAACAGA TATCGATGTT
TTTGATGCAA ATGAGATAAG CCGTCATGAT TTACGCCTCA TCTCCCAAGA ATATCAAGCC
AATGGCCCTT GTTTCCAATT AAGTCAGTGG TTAGACTCCT ATGCTCAGCA ATATGGGTTT
TATCGACCCT ATCAAGAGGC CTTGAGTGGC GTGAGTCCAG AACCTTGGCA TTTGAGTTAC
TTTCCAATTT CTAACGACTA TATAAATCAT TACGATACCG AGTCGATTAA AGCAGTTATA
AAGAACTCAT CGATTTTACA TAAAGACGCA ATACTAAAGC GAATCGACGC CCTCGTTAAC
GAATATGTTT TCCGAGTCGC TCCCATACCT GCGCCATAA
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| Protein sequence | MQQAAADDGI NIQICSAYRD FDKQQSIWNA KASGKRVLLN KESQPVSIES LSSSSLIDLI
LIWSAIPGMS RHHWGTDIDV FDANEISRHD LRLISQEYQA NGPCFQLSQW LDSYAQQYGF
YRPYQEALSG VSPEPWHLSY FPISNDYINH YDTESIKAVI KNSSILHKDA ILKRIDALVN
EYVFRVAPIP AP
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