| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1985 |
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| Symbol | |
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| ID | 5662379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2411113 |
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| End bp | 2411850 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236582 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001501842 |
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| Protein GI | 157961808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00836989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTAA CCTTATTAAT CCCTGCGCGA TATGGATCGA GTCGTTTTCC AGGTAAGCCA
TTGGCTCATA TCAATGGTAA GCCAATGATC CAGCACGTTT ACGAGCGTGC ATCTTTAGCT
AAAGGGCTTA AAGACATCTA TGTCGCCACC GATGATGTGC GCATTAAAAA CGCTGTAGAG
AGTTTTGGTG GCAAGGTTGT TATGACAGGT GAAAATGCCG CATCTGGTAC AGACCGTATC
GATGAAGCTA TTTCAATACT CGGCTTGGCT GATGATGACC TCGTCATTAA TTTACAAGGT
GATCAACCGC TTATCGACCC AATTGTTATT GAACAACTTG TAAGCGTGTG TGAACGCCAT
GCTGGTGAAT TCGATATGGC GACGTTAGGC GTAGAGATAA AGGATGAAGC TCAGCTTAAC
GATCCAAACC ATGTAAAAGT GGTATTCGAT AATAACCATA ACGCATTATA CTTTTCTCGA
GCGCGGATCC CTTTTGGCCG TGATACGAGC GACTACCCGG TATACAAGCA CATAGGGATC
TACGCCTATA CTCGTAAATT TATTCAAACC TTTGCTAAGT TACCACTTGG TCGACTAGAA
GAGTTAGAGA AGTTGGAACA ACTTCGAGCG CTTGAGTACG GCTACAAAAT CAAAGTTGCA
ATCAGCGCAT TTGATTTCCC AGAAGTTGAT ACTCCTGAAG ATATTCGAAT CTGCGAAGCA
AGACTTACCG TTGACTAA
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| Protein sequence | MNVTLLIPAR YGSSRFPGKP LAHINGKPMI QHVYERASLA KGLKDIYVAT DDVRIKNAVE
SFGGKVVMTG ENAASGTDRI DEAISILGLA DDDLVINLQG DQPLIDPIVI EQLVSVCERH
AGEFDMATLG VEIKDEAQLN DPNHVKVVFD NNHNALYFSR ARIPFGRDTS DYPVYKHIGI
YAYTRKFIQT FAKLPLGRLE ELEKLEQLRA LEYGYKIKVA ISAFDFPEVD TPEDIRICEA
RLTVD
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