Gene Spea_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1969 
Symbol 
ID5662363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp2395719 
End bp2396090 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content44% 
IMG OID641236566 
Producthypothetical protein 
Protein accessionYP_001501826 
Protein GI157961792 
COG category[S] Function unknown 
COG ID[COG3308] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00366875 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCGA CTACCCTATT TAAGCTGTGC CGCACGGGTT ATGTGGCATT GGTCATGTTG 
TTAGGGGCAT GGTTCATACG CCAAGGATTA ACTGGCGAAT ATTCGATGCT ATTTAGCCTG
CTTTGGCTTG TGCCGCTACT TCTTCCTCTC AAAGGCATTA TCACTGGCAA ACCGTACACT
TTTGCTTGGG CCAGTTTTAT CCTATGTCTT TATATGTTGC ATGCCCTCAC CCTGGTTTAT
GTAACAGAAA CTGACACATT ATTTGCTGTA GTTGAGTCAT TACTCATTGC AAGTTTACTG
GTTGGCTTCC CTTTTTATGC TCGGATCCGG GGCCGAGAAC TTGGGCTAGG TTTAAAGAAA
AAGAAAAGCT AA
 
Protein sequence
MNSTTLFKLC RTGYVALVML LGAWFIRQGL TGEYSMLFSL LWLVPLLLPL KGIITGKPYT 
FAWASFILCL YMLHALTLVY VTETDTLFAV VESLLIASLL VGFPFYARIR GRELGLGLKK
KKS