| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1900 |
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| Symbol | |
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| ID | 5662294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2311491 |
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| End bp | 2312213 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641236489 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001501757 |
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| Protein GI | 157961723 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0998935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATCCAAA ATAGCTTACG TTTGCGTTGG ATCAAGCGTG GTAATAGCCA GAGCGCATCT
TTATTAAGGC CGCTTGCTAA CTTTACCCGA GTGATGCTGG TGGCTTTAGC GGTACTCATT
TGGCTAGAAC ATTTAGGCTT TGATGCCTCA ACTATCCTCG CGGGATTAGG CATTGGTGGT
ATAGCGGTCG CTTTGGCTTC AAAACAGTCG ATAGAAAATT TTATTGGTAC CATCACTCTC
TATTCATCGG CTCCGATTAA GGTGGGTAAT ATTGGTCGCT TTGGCAGTAT AACTGGCACT
GTGGAGGAGA TAGGGCTTCG TTGTACCCGT ATTAGAACCA TCGACCGTTC GGTAATCAAT
GTGCCAAATG CGAGGCTATC AGAGATGGAT ATTGAAAATA TTTCTGAGCG AGAAAAGATC
CGTTTGAAAA CAGATATTCG CCTCGATTAC CAGACCAGTA CTGAGCAAAT TCACCATATC
ATCGATGACA TACGCTGCTT GCTAGAGCAG CACGATAAGG TCGAGGAAAG CCCTCTCAGA
GTAACTTTTA AGGGTTTTGG TTTATATGGC TTACAACTTA ATGTGTTTGC CTATATTGGC
ACAACAGATT TTGCAGAGTT TCAGTTGGTA TCGGAAGAGT TACATTTTGG CATTATGAAT
GTGGTGAGTA AGCATGGCTC ACGTATCGTT CCCGTGGTAC CAGTTGCTGC AACACAAGCT
TAG
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| Protein sequence | MIQNSLRLRW IKRGNSQSAS LLRPLANFTR VMLVALAVLI WLEHLGFDAS TILAGLGIGG
IAVALASKQS IENFIGTITL YSSAPIKVGN IGRFGSITGT VEEIGLRCTR IRTIDRSVIN
VPNARLSEMD IENISEREKI RLKTDIRLDY QTSTEQIHHI IDDIRCLLEQ HDKVEESPLR
VTFKGFGLYG LQLNVFAYIG TTDFAEFQLV SEELHFGIMN VVSKHGSRIV PVVPVAATQA
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