| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1885 |
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| Symbol | |
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| ID | 5662280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2294882 |
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| End bp | 2295772 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236475 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001501743 |
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| Protein GI | 157961709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGAA TTTTCTATTT CTTCCTGCTA CTAATCATGT TTTCTACCTC ATTCTCATCC
TATGCAACGG GGATAATATC GGTAGCGACT AAAACGCAGC AAACGACTGA AGAGTCGGAA
CCCCAGTTAC CAAAGCAGGA GAGTTTTGAC TATAAAGACA GTCTATTTCG AGATACTCCA
AGAGGCACCC TTGCGGGGCT TTTTGAGGCT GCGTTTGAGC AAGACTATGA CAAAGCCGCT
AAGTATTTAG ATCTACGATA TCTCCCAGAA AGCATGGATG CAGAGCTTGG TCCTGAATAC
GCCAAACAGT TGATTGCAAT TATTGAGCGT AATATTTGGG TTAATTTACA AGAGGTCGAT
GATACGCCGA GTGGCCGCAG TAATGACCAA CTGCCAAATT ATCGGGATGC CTTTGGTCGA
GTCGAAGTCA AAGGTAGTGA AATCACCTTA TTGCTGCAAA AGGTACCCAA TAAAGAGTTA
GGCTCTATTT GGAAGATCTC TAATGCAACC ATTGCAAAAG TACCTCTGTT ATACAGTGAA
TTGGGCTATG GGCCCGTAGT CGAATGGTTC GTACAGCACA TTCCTCAAGG GCATTTATTC
AAGTTAAATC TCTGGGAATG GGCGTTATTG GTTTGCTATC TAATATTGGC TTTGCTGGTG
GTCATTCCTA TTACTTGGGT GGCTAAGAAG CTGATATTGC GCAGTGATTA TCAGTATAAA
GAAGACGTTG CTCACCTTGT GATTGGACCC GCTCGTCTGC TTATAGCCTT GTTACTCGTA
AAAGGTTGGA TGGCGCATAC CACGTTATCG GCAAACGTGA TTGAAGTGGT TAATACTGGC
GTTTTATTGT TAATCGCGGT GATTTGGTTT ATCTGGTCTC TGGCAATCTA A
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| Protein sequence | MPRIFYFFLL LIMFSTSFSS YATGIISVAT KTQQTTEESE PQLPKQESFD YKDSLFRDTP
RGTLAGLFEA AFEQDYDKAA KYLDLRYLPE SMDAELGPEY AKQLIAIIER NIWVNLQEVD
DTPSGRSNDQ LPNYRDAFGR VEVKGSEITL LLQKVPNKEL GSIWKISNAT IAKVPLLYSE
LGYGPVVEWF VQHIPQGHLF KLNLWEWALL VCYLILALLV VIPITWVAKK LILRSDYQYK
EDVAHLVIGP ARLLIALLLV KGWMAHTTLS ANVIEVVNTG VLLLIAVIWF IWSLAI
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