Gene Spea_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1873 
Symbol 
ID5662268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp2283981 
End bp2285021 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content43% 
IMG OID641236463 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_001501731 
Protein GI157961697 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCG AACAAAACCC ACTGGGTCTA CTCGGTATCG AATTCACTGA GTTTGCAACA 
CCCGAACAAG ACTTTATGCA TCAGGTCTTT ATTGATTTCG GCTTTTCATT GTTGAAAAAG 
TCAAAGTCCA AAGAGATTTT GTACTACAAA CAAAACGATA TTAACTTTCT ATTGAATACC 
GAACGTAAAG GGTTTTCAGC AGAGTTTGCC AAGAGCCATG GTCCGGCAAT ATGTTCAATG 
GGCTGGCGTG TAGAAGACGC CCAATTTGCG TTCGAAAATG CCGTTGCTCG TGGTGCAAAA 
CCTGCAGATG ATGCAGCAAA AGATATGCCT TACCCTGCAA TTTATGGCAT TGGCGATAGC 
TTAATTTACT TTATCGATAC CTTCGGCGAA AACGATAATA TCTATGCCAC AGATTTTGAC 
GATCTAGACG AGCAAGTTAT TGTTGAGGAG AAAGGCTTTA TCGAAGTCGA CCACCTTACC 
AACAATGTCT ACAAAGGCAC CATGGAGTAC TGGTCAAATT TCTATAAAGA TATCTTTGGC 
TTTACCGAAG TGCGTTACTT TGACATTAAA GGCTCGCAAA CCGCGCTTAT CTCTTACGCG 
CTGCGCTCAC CCGATGGCAG CTTCTGTATT CCGATCAACG AAGGTAAAGG CAACGACAAA 
AATCAGATTG ATGAATACTT ACGTGAATAC GACGGTCCAG GTGTACAGCA CCTTGCCTTT 
AGAAGCCGCG ATATTGTTGG TTCACTCGAT GCGATGGAAG GCACATCGAT TCAAACCTTA 
GATATTATTC CTGAGTATTA CGACACCATT TTCGACAAGT TGCCACAGGT AACCGAAGAT 
CGTGACCGCA TTAAGCATCA CCAAATTCTG GTCGACGGCG ATGAAGATGG TTACCTACTG 
CAGATCTTTA CTAAGAATCT TTTTGGGCCA ATTTTTATCG AGATCATCCA GCGTAAAAAT 
AATCTCGGCT TCGGTGAAGG TAACTTTACC GCACTGTTTG AGTCGATTGA GCGTGATCAA 
AAGCGCCGTG GCGTGCTTTA A
 
Protein sequence
MASEQNPLGL LGIEFTEFAT PEQDFMHQVF IDFGFSLLKK SKSKEILYYK QNDINFLLNT 
ERKGFSAEFA KSHGPAICSM GWRVEDAQFA FENAVARGAK PADDAAKDMP YPAIYGIGDS 
LIYFIDTFGE NDNIYATDFD DLDEQVIVEE KGFIEVDHLT NNVYKGTMEY WSNFYKDIFG 
FTEVRYFDIK GSQTALISYA LRSPDGSFCI PINEGKGNDK NQIDEYLREY DGPGVQHLAF 
RSRDIVGSLD AMEGTSIQTL DIIPEYYDTI FDKLPQVTED RDRIKHHQIL VDGDEDGYLL 
QIFTKNLFGP IFIEIIQRKN NLGFGEGNFT ALFESIERDQ KRRGVL