| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1865 |
|---|
| Symbol | |
|---|
| ID | 5662260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2274200 |
|---|
| End bp | 2275420 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641236455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001501723 |
|---|
| Protein GI | 157961689 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.164344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGCAACG AACCTGACGC TCGTTTTTGC ATTGCTGTCG ACGAAAGCCT TTATCAAGTG
GAGTTTATCG CCGCCATTAG TCAGTTTTCT AAAGAGAACT GGAATAGGTT AATGCGTGAT
AGTAACCCAT TTAATAGATA TGAATATTTG GCGGCACTTG AGTCCAGTGG TTGTGTCTGT
ACAAAGACAG GATGGACCCC AATGCATATG CTGGTGCGCA AGGTTAATGG CGATGAAATT
GATGACGTTA TTGCGGTGAT GCCGCTTTAT ATTAAAGCGC ACTCCTACGG CGAATATATT
TTTGATTGGG CATGGGCAGA TGCCTATGAG CGCCATCAAA TACCTTATTA CCCTAAGCTT
CTTGCAGCTA TTCCATTTAC TCCTGTTACA GGCATGCGGC TTGGGAGCAT ATTTGAACAC
ACTTCTTTGC AGCAACAAGC GTTGTGGCAG GTGGTTAATC AGGCACTAAC TCGCTGCCTA
GCTGATTATG GTTTTTCCAG TTGGCACTGT CTGTTTTTAC CGAGATCTCA ATTTACTCAG
TTATCTAAGC AACAAAACCT TCAACGTTTA AGTACTCAGT TTCATTGGTT TAACCGTAAT
TATGCTGATT TTAATCACTT TCTTGATTCT CTTACTTCCA GAAAGCGTAA AGATATTAAA
AAGGAAAGGC AGAAAGTCAG TAGGGTGGGC TTAACCTTTG AGTTTGTTGA AGGCGATGCC
GTGACAACAG AGTTATGGCA ACACTTTTAT GCATGCTACC AAAGCACCTA CGCGAAACGC
TCAGGGCATT ATGGTTATCT TAACTTGGAA TTCTTTGAGG CTATTGGAAG CACGTTGAGT
GAACAGATTG TGTTACTGCT AGTGAGAGAT CCACAAAGGC AGATAATCGC ATCAGCATTG
TATTTTAAAT CTGCAACTCA TCTGTATGGT CGCTATTGGG GGGCATTAGT GGATGTTGAT
GGATTGCACT TCGAAGCCTG CTATTACCAA GGTATTGAAT ACTGCATTGC AAATAAATTA
CAGGTGTTTG ATGCGGGGGC ACAAGGAGAG CATAAGGTTT CTAGAGGGTT CCAGCCTGTT
GAAACCTATT CCAATCATGA GGTGGCTCAT GGTGAATTTA GGTCAGCGAT AGAGAGTTTC
ACCCAACAAG AGGCACAAAA TATTAAGATT TATATGCAAC AATTGAAAGC TAAGCTGCCT
TATAAACACC AAAGCTGTTA G
|
|---|
| Protein sequence | MGNEPDARFC IAVDESLYQV EFIAAISQFS KENWNRLMRD SNPFNRYEYL AALESSGCVC
TKTGWTPMHM LVRKVNGDEI DDVIAVMPLY IKAHSYGEYI FDWAWADAYE RHQIPYYPKL
LAAIPFTPVT GMRLGSIFEH TSLQQQALWQ VVNQALTRCL ADYGFSSWHC LFLPRSQFTQ
LSKQQNLQRL STQFHWFNRN YADFNHFLDS LTSRKRKDIK KERQKVSRVG LTFEFVEGDA
VTTELWQHFY ACYQSTYAKR SGHYGYLNLE FFEAIGSTLS EQIVLLLVRD PQRQIIASAL
YFKSATHLYG RYWGALVDVD GLHFEACYYQ GIEYCIANKL QVFDAGAQGE HKVSRGFQPV
ETYSNHEVAH GEFRSAIESF TQQEAQNIKI YMQQLKAKLP YKHQSC
|
|---|
| |