| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1860 |
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| Symbol | |
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| ID | 5662255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2264244 |
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| End bp | 2265818 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641236450 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001501718 |
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| Protein GI | 157961684 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAACA ACCAACCCGT GACTCAAACG GAAAAGACTC TAACCGATAA TTGTATTTTA
CTGTCGACCA CCAATCTTGA CGGTAATATT AAGTATGCCA ATGAGAGCTT TACCAAGGTT
AGTGGCTACA GTTTTGATGA GTTACAAGGT CAACCTCACA ACATGGTGCG GCACCCTGAT
ATGCCAGAGG CTGCCTTTCA GTCACTTTGG GAGCGTATTA AACAAGGGAA ACCTTGGGTT
GGTATTGTTA AGAATCGCAC CAAGTCAGGC GATCACTACT GGGTTAATGC ATATATAGCC
CCTGTGTATG AAAATGGCAA AATCCACGAG TATCAGTCGG TACGCCGTAA GGCTACACCG
GAGCAAATCC TGCGCGCAGA AGCGATTTAC CAGCAGGTAA AAGCGGGAAA GCAACCTAAG
GCGCTACGCA ACCCGCTACT AGGTTTTGGG GCAAAGTTGT ATGCTTGGCT GCTGTCGATG
TTAGTGATGG CGGTTATTTT AGCGAGTTAT TCACCGATAG CTGCAGTGAT ACTACTTAGC
CTAGTTGGCG CGATTGGCTT GCACCGTATC TTGAAGCCAT TCAACCAATT AGTGACACAA
GCTAAAAATA CTGTCGATGA TCCTCTCGCT AAAGGTGTAT TTACCGGCCG GCAAGATGAA
TTAGGCACAA TAAGCTTTGC GCTGCAGTTC TTACTTACAG AAACTGGCGG CGTGATAGGC
CGAATGGCGG ATTCAGCAGG CTCAATCGAG TCCCTTAGCG CGAGTTTAAA CGATACCATT
CACAATACCC GACAACGTGC CGACAGCCAG AGTATGCAAA CCAGCCAAGC GGCCACCGCG
ATGGAAGAGA TGAGCGCTAG CTTTGCTGAA GTGAATAATA ATATTCACAG CGCGGCGAGA
GAGATGTCGG TGAGTAACCT TTCTGCAGAA AAGGGTCATC AACTGCTTGA ACGGGTGATT
GAGTCCATTA CACAACTCAA AGATGAGGTG GGTAACTTTG CTTCAGTCGT CGCGTCAATC
GAACAAGATA GCCAAGATAT CAATAAGGTA TTGGAGGTGA TCCGTGGCAT TGCAGAGCAA
ACAAATCTGT TAGCACTTAA CGCTGCGATT GAAGCGGCGA GGGCGGGAGA GTCGGGTCGA
GGCTTTGCAG TGGTTGCCGA TGAAGTGCGT CAACTTTCTA GCCGTACCAG TGAATCTACC
TCTCATATCG AAGCCATTGT TGCTAAGTTC CGCGAAAGTA CCGTTATGGC AGCTAAGACC
ATGGAGGCCG GTCAACGCAG TGCTGAGCAA TCGGTAGACT TGGCAAAACA GGTTGATGAG
TCATTTGAGG CACTACGTCA CTCGATTATT AAGATGAATA CTATGAGTGA TGAAAATGCT
TGTGCTATGA CACAGCAAAC GACTGTCGCC AACGATATCA GCCACTCAAT TCAAGTGATC
AGTGAGCTCG CAATTGAGAG TCTTGAACAG ACACAAGATG CGGCAGAGCG TGGTCAGCAA
GTGTCTCGCC TATCGACTAA AACCCATAGT TTATCTAAGC AGTTCTGGGA GCAGAGCGTA
CAGAGAAAGA TTTGA
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| Protein sequence | MRNNQPVTQT EKTLTDNCIL LSTTNLDGNI KYANESFTKV SGYSFDELQG QPHNMVRHPD
MPEAAFQSLW ERIKQGKPWV GIVKNRTKSG DHYWVNAYIA PVYENGKIHE YQSVRRKATP
EQILRAEAIY QQVKAGKQPK ALRNPLLGFG AKLYAWLLSM LVMAVILASY SPIAAVILLS
LVGAIGLHRI LKPFNQLVTQ AKNTVDDPLA KGVFTGRQDE LGTISFALQF LLTETGGVIG
RMADSAGSIE SLSASLNDTI HNTRQRADSQ SMQTSQAATA MEEMSASFAE VNNNIHSAAR
EMSVSNLSAE KGHQLLERVI ESITQLKDEV GNFASVVASI EQDSQDINKV LEVIRGIAEQ
TNLLALNAAI EAARAGESGR GFAVVADEVR QLSSRTSEST SHIEAIVAKF RESTVMAAKT
MEAGQRSAEQ SVDLAKQVDE SFEALRHSII KMNTMSDENA CAMTQQTTVA NDISHSIQVI
SELAIESLEQ TQDAAERGQQ VSRLSTKTHS LSKQFWEQSV QRKI
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