| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1705 |
|---|
| Symbol | |
|---|
| ID | 5662101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2071143 |
|---|
| End bp | 2072183 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641236292 |
|---|
| Product | proline racemase |
|---|
| Protein accession | YP_001501564 |
|---|
| Protein GI | 157961530 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.360365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCGA TCACTATAAC CCCTGATTTA TCGAGCAATT TCAAAGATTT TGTCACCATA
GATGCTCACA CCGAAGGGGA GCCGTTGAGG GTTATTATTT CGGGATATCC AGAGATCAAA
GGTTCAACCA TCTTAGAGAA GCGCCAATAT GTGCAGCAAA ATCTTGATAC TTATCGCAAA
TTGTTAATGC ATGAGCCAAG AGGTCATGCA GATATGTACG GTGCACTTAT TACTGAAGCT
GTTACCGAAG AGGCCGATTT TGGTGTGCTT TTCCTGCACA ATGAAGGTTA TAGCAGCATG
TGCGGACACG GAATTTTGGC CTTAGTTAAG GTGATGTGCC AAACCGATTC TATCGATTTA
GGGCTAGAGC CACGCACCAT TAAAATCGAT TCACCAGCGG GTTTGATTAC CGCCAAGGCT
TATCGAGATA GCCAAGGGAA AATTCAAGCC AGCTTTAAAA ATGTCGACTC TTGGGCCGAT
GCATTAAATT GCAGTGTTAA CGTCGAAGGC TTTGGCGAGG TTAACTATGA TATAGGCTTT
GGTGGAGCGT ATTATGCGTA TGTCGACGCT GACGAGCATG GTATAAGCTG TGGTCAAGAT
AATGTTGCAC AGCTTATCGA TGTAGGAAGG CGAATTAAGC ATGCTGTGAT GGCATCACAT
ACGTTAGTGC ATCCGCTTGA AGAGGACTTG AGCTTTTTAT ATGGCACCAT CTTTACCTCT
AAGAAGGTGA CCAATCCTGA GGCGCACTCC CGCCATGTGT GTATTTTTGC TGATGGGGAG
GTGGATCGTT CACCTACAGG TACAGGGGTT TCTGCTCGGG TGGCGCTACT ATACGCTAAA
GGCGAGGTAG CCTTAAATAC ACCGATAATG ATTGAAAGCA TTGTGGATGG CAGAATGATT
GTTAGTGCAT CGGCTGAGTC AGAGTTTCAC GGCAAGCAAG GGGTGATCCC TGAGGTTTCT
GGTCGCTCTT TTATTACCGG TAAGCACCAG TTCTTTATCG ATCCTGACGA TGTGTTCCAA
AATGGCTTTA TGTTGCGTTA A
|
|---|
| Protein sequence | MQSITITPDL SSNFKDFVTI DAHTEGEPLR VIISGYPEIK GSTILEKRQY VQQNLDTYRK
LLMHEPRGHA DMYGALITEA VTEEADFGVL FLHNEGYSSM CGHGILALVK VMCQTDSIDL
GLEPRTIKID SPAGLITAKA YRDSQGKIQA SFKNVDSWAD ALNCSVNVEG FGEVNYDIGF
GGAYYAYVDA DEHGISCGQD NVAQLIDVGR RIKHAVMASH TLVHPLEEDL SFLYGTIFTS
KKVTNPEAHS RHVCIFADGE VDRSPTGTGV SARVALLYAK GEVALNTPIM IESIVDGRMI
VSASAESEFH GKQGVIPEVS GRSFITGKHQ FFIDPDDVFQ NGFMLR
|
|---|
| |