| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1703 |
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| Symbol | |
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| ID | 5662099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2069591 |
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| End bp | 2070592 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641236290 |
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| Product | hydroxyproline-2-epimerase |
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| Protein accession | YP_001501562 |
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| Protein GI | 157961528 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.129643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAG GCACGTTTTT TTGCGTTGAT GCTCATACCT GTGGCAACCC AGTCAGATTA
GTTACCAGCG GCCATCCTCA CCTTCTCGGC GATAACATGA GCGATAAACG CCAACATTTT
CTTCGTGAGT ATGATTGGAT CCGTAAAGCC TTGATGTTTG AACCTCGCGG CCACGACATG
ATGTCAGGTG CTTTTCTTTA CCCTCCTTGT TCAGACAGCG CCGACGCCTC AATCCTTTTT
ATCGAAACCA GTGGCTGCTT ACCTATGTGC GGTCATGGCA CCATAGGCAC TATCACGGCC
GCTATTGAGT CGGGCTTACT TACAGCAAAG ACACCTGGGC AATTGATTAT CGATGTTCCA
GCAGGACAGA TAAAAATCGA CTACCAACAA ACAGGTGAAA AAGTTGATTG GGTGAAAATT
TATAATGTTG CTGCTTACTT AGCTCATCAA GATCAAATCC TAGACATTCC AGGACTCGGC
ACGCTCAAGG TCGATGTGTC ATACGGTGGT AACTATTACG TTATCGTCGA TCCCCAAGCA
AACTTTCCGG GCCTTCGTCA CTGGAGTGCA GGTGATATTT TAAAGTGGAG TCCGATAGTT
AGAGAAGTGG CGCAGCAACA ATTGAGCTGC ATACACCCAG ATGACCCAAC CGTGAACGGC
GTTAGCCACG TGCTTTGGAC TGGAGATACC ATCAGCGATG GTTCCGACGG TGCTAATGCC
GTTTTCTACG GCGATAAAGC TATCGACCGT TCGCCTTGCG GAACAGGCAC CAGCGCGCGT
CTTGCACAGC TTTATACCAA AGGTCTGTTG AGCGTTGGCG ATGAATACAC CCATGAAAGC
ATTATCGGCA GCCAATTTGT CGGCCGTATC GAAGCTGAAA CGACAGTCGG CGATCACAAG
GCGATAATGC CAAGTATCAA AGGCTGGGCA CGGATCATCG GCAAGAATGC CATTACTGTA
GATGATAACG ACCCATATGC ATTCGGTTTC CAGGTAGTGT AA
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| Protein sequence | MLKGTFFCVD AHTCGNPVRL VTSGHPHLLG DNMSDKRQHF LREYDWIRKA LMFEPRGHDM
MSGAFLYPPC SDSADASILF IETSGCLPMC GHGTIGTITA AIESGLLTAK TPGQLIIDVP
AGQIKIDYQQ TGEKVDWVKI YNVAAYLAHQ DQILDIPGLG TLKVDVSYGG NYYVIVDPQA
NFPGLRHWSA GDILKWSPIV REVAQQQLSC IHPDDPTVNG VSHVLWTGDT ISDGSDGANA
VFYGDKAIDR SPCGTGTSAR LAQLYTKGLL SVGDEYTHES IIGSQFVGRI EAETTVGDHK
AIMPSIKGWA RIIGKNAITV DDNDPYAFGF QVV
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