Gene Spea_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1635 
Symbol 
ID5662032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1980710 
End bp1981354 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content46% 
IMG OID641236223 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001501495 
Protein GI157961461 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.702342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTATC AGTTAATACC CGTCACCCCA TTTCAGCAAA ATTGTAGTTT AATCTGGTGC 
GACCAAACCA TGAAAGCGGC GGTAGTCGAC CCAGGTGGTA ATATCGAGCG TATTCTAGAA 
GAAGCAGCCA AAAATAAGGT GGTGGTGGAA AAAGTATTAC TGACTCACGG CCATATAGAT 
CATGTTGGCG CGGCGAAATC ATTAGCCGAA CAACTCAATG TGCCCATTAT TGGTCCTCAT 
AAAGCCGATG AATACTGGCT AGATAGCTTA CCGAAACAGA GTCAGCATTT TGGTTTTGTG 
CATTGTGACG CTTTTGCGCC AACGCAATAT CTCGAAGATG GCGACGACGT CACTGTAGGT 
AATCAAGTCT TGAAGGTACT GCATTGCCCA GGTCATACAC CCGGCCACGT GGTGTTTTTT 
GCCCAATCGG CAAAGTTAGC CTGGGTCGGT GATGTGCTGT TCAGAGGCTC CATCGGTCGA 
ACAGATTTCC CGTTATCGAA TCATCAAGAT TTGATTGATT CGATCACCCA AAAACTGTGG 
TCATTAGGCA GTGACGTCCA GTTTATTCCT GGTCACGGTC CACTATCGAC TTTTGGCGAT 
GAGCGAGTAC AAAACCCCTT TGTAGCCGAT CAATTATTCA GCTAG
 
Protein sequence
MKYQLIPVTP FQQNCSLIWC DQTMKAAVVD PGGNIERILE EAAKNKVVVE KVLLTHGHID 
HVGAAKSLAE QLNVPIIGPH KADEYWLDSL PKQSQHFGFV HCDAFAPTQY LEDGDDVTVG 
NQVLKVLHCP GHTPGHVVFF AQSAKLAWVG DVLFRGSIGR TDFPLSNHQD LIDSITQKLW 
SLGSDVQFIP GHGPLSTFGD ERVQNPFVAD QLFS