Gene Spea_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1604 
Symbol 
ID5662001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1942884 
End bp1943606 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content48% 
IMG OID641236192 
Producthypothetical protein 
Protein accessionYP_001501464 
Protein GI157961430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0355335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAA TGACAAATGT GTGTAAGGGC GGCGGATTTT TAAAGGCAGT CATAGTTATG 
GGCATACTAG GGTTAACAGC CTGCAGCTCT GAGCCCGCAA GCCTACAACA AGGGCCCGAT 
GCAGAGATGA CCAAAGAGGG TTTAGTCAGA GTCGACCATT CTAAGTTGGA CCTCTCTTAT 
GCTCGGCCCG ATGTCAACTG GGCTAACTAC ACTAAGCTCT ATTTTGAGCC AGTTAAAGTC 
ACCAATGATC ATCCTGCCGA TTACCAACCA CCTAAGATAG ATAAAAGAGC CGATGGCCTC 
AATGCAACTT ATGAGTTGCC TCAAGAAGCA CTGGCTAAAA TGTCAGAGCA GTTTAGCCTA 
ACGGTAAAAG AAGTGTTTAA CAGTGAGCAA CCATTTGAGC TGGTGGCCCA ACCGGGCCCT 
AACACCTTAG TCATTGAAGC GGCGGTTACT GACATTCGCC TCAGTGCACC TCTAGAGTCC 
AGTCGAAGAA GCTTCAGCTC GATGGGGCGT ACGTATACAG AGAATTCAGG CTCTATGATG 
TTACTCGCGG TGATTAAAGA TGGAGAAACC GGTGAGGTGT TAGCCAAGGC TGCGGACAGA 
GGGCAAGGGT TTAATCAGTG GAGTCAAAAT ACTCAAGTGT TTAACTGGGG CGATGTCAAA 
ACCGTTTACC GCAGTTGGGT GAATGATTTT AAGAACGCTC TTATGAATGC AGGAGCCGAA 
TAG
 
Protein sequence
MIRMTNVCKG GGFLKAVIVM GILGLTACSS EPASLQQGPD AEMTKEGLVR VDHSKLDLSY 
ARPDVNWANY TKLYFEPVKV TNDHPADYQP PKIDKRADGL NATYELPQEA LAKMSEQFSL 
TVKEVFNSEQ PFELVAQPGP NTLVIEAAVT DIRLSAPLES SRRSFSSMGR TYTENSGSMM 
LLAVIKDGET GEVLAKAADR GQGFNQWSQN TQVFNWGDVK TVYRSWVNDF KNALMNAGAE