Gene Spea_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1440 
Symbol 
ID5661837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1754834 
End bp1755622 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID641236002 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_001501300 
Protein GI157961266 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.022159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCATG TATTTAAACA GGAGTGGTTA GGACCTCTTC TCGATATTGC GACTGAAGCT 
GGAGAGGCCA TTATGGCCAT ATATAAGCAG GATGATCTAG GTGTGTTGAC TAAGTCTGAT 
GACAGTCCTG TAACGGCAGC TGATTTGGCG AGCCATCAGG TAATTGTTGA AAGGCTGAAG 
CAATTAACCC CTGATATCCC TGTCATGTCG GAAGAGTCGA CGGATATTGA TTGGCAGCAG 
AGGCGTCATT GGCAATCATA TTGGCTGATT GACCCACTCG ATGGCACCAA AGAGTTTATT 
AAGCGCAATG GCGAGTTCAC AGTCAATATC GCCTTCATCC ACCATGATAC CGCCGTCGCA 
GGCGTTGTAT ATGCCCCTGT TCTGGATAAA TGCTTTTATG GTGAACTGGA AAGTGGAGCT 
TGGTTAAAAC ATGCTGGAGA ACGAATCGAG TTACCTAAAG TGAATAGCTC GAAAGCGCTT 
GTTCCTCGAA TTGTTGGTAG TCGATCTCAC GCTAGCCCTG GTTTACAAGC ATTCTTGCAA 
GAGCTTGGCG AGCATGAGAT GAAGAGTGTT GGTAGTTCGC TTAAGTTTTG TCTTTTGGCT 
GAAGGAGAGG CCGATATTTA CCCAAGGTTG GGGCTAACCA GTGAGTGGGA TACCGCAGCT 
GCGCAGGCTG TGCTGGAAAG TGCTGGTGGT CGAGTGGTGC AATATGACAC TAATATTCCT 
CTTAATTACA ATCAAAAATC TGACATACTG AATCCCTATT TTATTGCGTA TGCGCCACAC 
TGGCATTGA
 
Protein sequence
MNHVFKQEWL GPLLDIATEA GEAIMAIYKQ DDLGVLTKSD DSPVTAADLA SHQVIVERLK 
QLTPDIPVMS EESTDIDWQQ RRHWQSYWLI DPLDGTKEFI KRNGEFTVNI AFIHHDTAVA 
GVVYAPVLDK CFYGELESGA WLKHAGERIE LPKVNSSKAL VPRIVGSRSH ASPGLQAFLQ 
ELGEHEMKSV GSSLKFCLLA EGEADIYPRL GLTSEWDTAA AQAVLESAGG RVVQYDTNIP 
LNYNQKSDIL NPYFIAYAPH WH