| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1439 |
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| Symbol | |
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| ID | 5661836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1752143 |
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| End bp | 1754695 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236001 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001501299 |
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| Protein GI | 157961265 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.247018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAACA GTGATAATAG CGTTTCTATA TGGCCGCTTA CACCTTCTGT TAAGCTGATT
GCGATTGTTA TTTTGTTTGT AGCAGCTGCG TATTGGATAG CAGGAGTGGG ATCTAAGGAG
CGTAGAGATG CGTCAAAGAT CTGGCCTGTT TTAGAGCTGG AGGTGAAGCA AGACGCTGGG
ATTGAACGCA AAATTTCGCA GCTATTGGCA GACATGACAT TGGAGCAGAA AATTGCGCAG
ATGATCCAAC CTGAGATCGG TGATATTAGC GTTGAAGACA TGAGGCGGTA TGGCTTTGGC
TCCTATCTTA ATGGTGGAGG CTCTTTTCCA AACGGCAACA AGCATGCAAC GCCGAGCGAT
TGGATTGCAC TAGCAGAAGC CATGTATCAA GCGTCAGTAG ATGATTCTAT AGATGGCTCG
ACCATTCCAA CAATGTGGGG CACGGATGCT GTGCACGGTC ATAACAATGT GATTGGCGCG
ACGCTGTTTC CCCATAACAT AGGGTTAGGG GCGGCAAATA ACCCCGAACT TATTGAAAAA
ATTGCAACCA TAACGGCTAA AGAAGTGATG GTTACCGGTA TTGATTGGGT ATTTGCGCCA
ACGGTTGCTG TGGTGCGAGA CGATCGCTGG GGCAGAACGT ATGAGGGCTA TTCAGAAGAT
CCGCAGATAG TTAAGGCTTA CGCTGGCGCA ATCGTTAGAG GGTTACAGGG GCGTGCGAAT
GCCGATTTTC TTGGTGACGA GCGGGTTATC GCAACCGTTA AACATTTCTT AGGGGACGGA
GGCACGACTG ATGGTGTTGA TCAGGGAGAT AATACCTTTG CAGAGCAGCA ACTCTTCGAC
ATTCATGCCC AAGGCTATGT GGGAGGAATA TCGGTAGGGG CGCAAACGGT AATGGCGTCA
TTCAACAGTT GGAATGGCGT TAAGAATCAC GGTAATCGCT ATCTGCTGAC ATCAGTTTTA
AAAGATCAAA TGGGGTTCGA CGGGCTTGTG GTGGGTGATT GGAACGGTCA TGGCCAGATT
TATGATTGTA GTAATGAGAG CTGTCCCCAG GCAGTCAATG CGGGCCTGGA TGTATATATG
GTACCGACAA AGGCTTGGAA ACCTCTTTTT GATAATACCC TTGCACAAGT AAATAGTGGT
GTCATCCCCA TTGAGCGTAT CGATGATGCG GTAACGCGGG TTTTACGTGT AAAAATGCGT
GCCGGCTTAT TCGATAAACC GAGTCCAGCT AAACGCGCAT TATCGGGTAA CACGGCATTA
ATTGGTGCTA AGGCGCATCG TGATGTGGCA AGGCAAGCGG TAAGGGAGTC ACTAGTGCTG
CTTAAGAATG AAGGGGGAGT ATTACCTTTG TCGCCCACGC AGACTGTGAT GGTGGCTGGT
GATGGCGCAG ATAACATAGG TAAACAATCT GGTGGTTGGT CAATAACTTG GCAAGGCACT
TATAATACCA ATGCCGATTT TCCCGGTGGC AGTTCTATCT ATAGCGGTAT TCAAGCACAT
GTGACTCAGG CTGGTGGTAA GGCATTACTA AGCCCTAATG GTGATTATGC GGTAAAGCCT
GATGTGGCGA TTGTGGTGTT TGGAGAGAAC CCATACGCAG AGGGTCATGG CGATCTCGAT
AATCTTGAGT ATCAGCGAGG CAATAAACAT GATCTTGCCT TGCTACAAAA GTTAAAGGCA
CAAGGGATCC CTGTGGTCGC GGTGTTTATC AGTGGCCGAC CTATGTGGGT GAATGCAGAG
ATTAATGCCG CAGACGCCTT TGTGGCTGCT TGGTTGCCCG GTAGTGAGGG CGAGGGGGTT
GCAGAGGTTC TGTTTAGGGA TGCGAGTGAA GGCGTTCAAT TCGATTTCAG CGGTAAGCTA
TCTTTTTCAT GGCCTAGTAG TCCTACGCAA ACAGCTATTA ACCGATTCGA TAATGATACC
CCTCTATTTC CCTACGGATA CGGATTAACC TATGCCGACA GTGCGAGGTC AATGGTGCTT
AATGAGAAGG CCGATTTTGT GACGGTTCAG AATCAATACA TGGCGATTTT TGATCGGGCA
GTACAAGCGC CATGGGTGAT GATGATAGGC AGTAAGAATG AACAGTTATC AGTAGATGGC
AGTGAAACTC AAGCTGAGGT CGTATATTTG CGAAGCATAG ACAAAAATGT ACAAGAAGAT
GCGCGCTTAT TTAAGTTTAA TGGGCAAGGG GAGGGGGTTG TTCGTTTTAG AAGTAATTTC
CCTCGTGATT TAAGGGCATT TATAGAGCGT CCATCGATGT TATCGTTTGC GGTGAACATT
GAGCAGTTAG GTGAGCAGGC TGTTAATTTG AGCATGGGTT GTGAAGCGGA CTGCGGTGAA
CCTATCGATA TCTCAACGCT GCTTGCCAAG CAGCCGATTG GACAGTGGCA AACGGTGACA
GTGCCGCTAA ACTGTTTTGC CAAATCAGGG GTTAATTTTG CGAAAGTAAA CTCCCCATTC
TCACTGAGCA GCGCAAGTAA AATGAGTCTC AGTTTAGCTG ATATTGAGTT TGCTCCTATT
ACGGATGAAA AGCCTTCAAT GTCTTGCCTT TAG
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| Protein sequence | MSNSDNSVSI WPLTPSVKLI AIVILFVAAA YWIAGVGSKE RRDASKIWPV LELEVKQDAG
IERKISQLLA DMTLEQKIAQ MIQPEIGDIS VEDMRRYGFG SYLNGGGSFP NGNKHATPSD
WIALAEAMYQ ASVDDSIDGS TIPTMWGTDA VHGHNNVIGA TLFPHNIGLG AANNPELIEK
IATITAKEVM VTGIDWVFAP TVAVVRDDRW GRTYEGYSED PQIVKAYAGA IVRGLQGRAN
ADFLGDERVI ATVKHFLGDG GTTDGVDQGD NTFAEQQLFD IHAQGYVGGI SVGAQTVMAS
FNSWNGVKNH GNRYLLTSVL KDQMGFDGLV VGDWNGHGQI YDCSNESCPQ AVNAGLDVYM
VPTKAWKPLF DNTLAQVNSG VIPIERIDDA VTRVLRVKMR AGLFDKPSPA KRALSGNTAL
IGAKAHRDVA RQAVRESLVL LKNEGGVLPL SPTQTVMVAG DGADNIGKQS GGWSITWQGT
YNTNADFPGG SSIYSGIQAH VTQAGGKALL SPNGDYAVKP DVAIVVFGEN PYAEGHGDLD
NLEYQRGNKH DLALLQKLKA QGIPVVAVFI SGRPMWVNAE INAADAFVAA WLPGSEGEGV
AEVLFRDASE GVQFDFSGKL SFSWPSSPTQ TAINRFDNDT PLFPYGYGLT YADSARSMVL
NEKADFVTVQ NQYMAIFDRA VQAPWVMMIG SKNEQLSVDG SETQAEVVYL RSIDKNVQED
ARLFKFNGQG EGVVRFRSNF PRDLRAFIER PSMLSFAVNI EQLGEQAVNL SMGCEADCGE
PIDISTLLAK QPIGQWQTVT VPLNCFAKSG VNFAKVNSPF SLSSASKMSL SLADIEFAPI
TDEKPSMSCL
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