Gene Spea_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1372 
Symbol 
ID5661771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1668689 
End bp1668958 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content44% 
IMG OID641235936 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_001501234 
Protein GI157961200 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.558893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTG AATCACTCGT TGATATCTTT CGAGAAGCTT TGGCCGTTAT CGTCATAATC 
GTGTCGATGA TTATTGTGCC TGGTCTTATC ATAGGTCTAG TAGTAGCGGT GTTTCAGGCT
GCGACCTCAA TTAACGAGCA AACCTTGAGT TTTCTTCCGC GCTTGCTAAC AACCTTATTA
GCGCTGATGT TGATGGGCCA CCTTTTAATC CAGATGATGA TGGACTTCTT CATGCAGATG
GTCGATATGA TCCCTCAGGT GATAGGTTAA
 
Protein sequence
MSPESLVDIF REALAVIVII VSMIIVPGLI IGLVVAVFQA ATSINEQTLS FLPRLLTTLL 
ALMLMGHLLI QMMMDFFMQM VDMIPQVIG