Gene Spea_1365 details

Gene Information

• Locus tag: Spea_1365
• ID: 5661764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1663244
• End bp: 1663690
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641235929
• Product: flagellar export protein FliJ
• Protein accession: YP_001501227
• Protein GI: 157961193
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAGAG CCGATCCGTT ATTGATGGTG TTAAAGCTTG CCGAAGACGC GGAAGAGCAG 
GCGTCACTGC AGCTTCGCTC GGCACAGCTT GAACTGCAAA GACGTCAAAA TCAGTTAGAT 
GCGCTGCAAA ATTATCGCCT CGATTATATG AAACAGATGG AGCAGCAACA GGGGCAAAGT 
ATCAGCGCCA GCCACTACCA TCAGTTTCAT CAATTTGTGC GTCAAATCGA TACGGCGATT 
ATACAGCAGG TCAATACGGT GCAAGATGCC GATAATCAGC GCCAGCACCG GCAGGTATAT 
TGGCAAGAGA AGCAGCAGAA GCGTAAAGCG GTTGAGCTGT TATTAGCAAA TAAAGCCGAA 
AAGGCGCAGC TCGCCGAGTT ACGCGCCGAG CAGAAGATGG TTGACGAGTT TGCGTCACAG 
CAGTTTTATC GTAAAAGGCA GCGTTAA 

 

Protein sequence

MARADPLLMV LKLAEDAEEQ ASLQLRSAQL ELQRRQNQLD ALQNYRLDYM KQMEQQQGQS 
ISASHYHQFH QFVRQIDTAI IQQVNTVQDA DNQRQHRQVY WQEKQQKRKA VELLLANKAE 
KAQLAELRAE QKMVDEFASQ QFYRKRQR