Gene Spea_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1276 
Symbol 
ID5661675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1561552 
End bp1562637 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content39% 
IMG OID641235838 
Producthypothetical protein 
Protein accessionYP_001501138 
Protein GI157961104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGAAG CACGGAATTA TAAAAATTTA AACTTAGTTA GAGCAAACAT AGAGGATGTC 
GTTAACACGT TTATGGATCA GCATGGCTTT ACTCTTGAGT CTATTGGAGA TATGCCCGGT
GCTCAGAATG GAAAAAGAGT TGTATATGGT CAGGCTGGTA GCTTGTATGC GACGGTTGAT
ATCTTCTTCA ATAACACTGG CACTTCAACC GTACAGTTTA AAACAGGTAG AAACCAGCTA
TTAGGGAAGC GACTTGCTGA TTGCTTGTAC GAAACGATTA ATCCAGTTGA ATTTGAAAGT
GTAAATATGG TTGTAGATGG TTTTATTGAA GAATCGATAT CTCCAGTTTT ACTTTGTACT
GCAGATGAGA CCTATATAGA ACTGCAGGAA CATCATAGAG AGGCTAGCAA GATAGTCTGG
AAGCTTATTT CTATTGAGTT TCAAGATGAA CTCACGGTAA CACTCCATAC AACAACTCGA
CTGTTGCAAA TACAGGGTCG CCCTTTATCT TGTTACAGAG CTTTTATATT TAACCTGACA
GAGCTACTTG ATCTTCAAGG ATTAGAGAAG GTTTTATCAA GGCAAGATGA TAGTAAAGTT
GAAATCATTC AGCAGGAAGT CGCTCGTAGT TATCTTCAAA CTGTTATGGG GGATTCCTAT
CGCCACTTGC ATAAAAATGT TGAAAAATTG CTCGTTTCAG GTCTCTGTGT TAAACTCGCC
GCCCCTCAAC TACCAGACTA CTGTATGTTG CTGTACCCGG AGCTACGCTC TATTGAAGGT
GCTCTAAAGG GGAAAATGGC ACTGTTTGGA TTAGTTGTAG GCCGTGATGG TTTTGGGGGG
TTCTTCGAAA AAATCCCAGG AAAATACCAA TTAGAAGCGT CGCATAGAGC ACATTTTCCA
TCAGATGTGA GTGCAAATAT TGTTGAAGAT GCTTATACTT TCTACAATAA AGAACGTCAT
GGCCTCTTCC ACATGGAGCC TATTGTGGAT ACTAGTAGAG TGATGAGTGA TATAAGTCAT
TTAATGACGA AATCAAAGCA CTCTTGGGAA CATATTAAAA AGTTATATAG TATACAAAAT
GTATAA
 
Protein sequence
MTEARNYKNL NLVRANIEDV VNTFMDQHGF TLESIGDMPG AQNGKRVVYG QAGSLYATVD 
IFFNNTGTST VQFKTGRNQL LGKRLADCLY ETINPVEFES VNMVVDGFIE ESISPVLLCT
ADETYIELQE HHREASKIVW KLISIEFQDE LTVTLHTTTR LLQIQGRPLS CYRAFIFNLT
ELLDLQGLEK VLSRQDDSKV EIIQQEVARS YLQTVMGDSY RHLHKNVEKL LVSGLCVKLA
APQLPDYCML LYPELRSIEG ALKGKMALFG LVVGRDGFGG FFEKIPGKYQ LEASHRAHFP
SDVSANIVED AYTFYNKERH GLFHMEPIVD TSRVMSDISH LMTKSKHSWE HIKKLYSIQN
V