| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1235 |
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| Symbol | |
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| ID | 5661634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1504994 |
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| End bp | 1506181 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235797 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_001501097 |
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| Protein GI | 157961063 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.435884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAT CAAACCGTTT TAACCACCTA AAATCCAGTA CTCTTTCACG TACAACGTCT
TCAGCTAGTA CCTGCTCATC GAGTAAATCG TCAGCGGCCA GCTCAACAAC GAGTATAGAA
ATCAATTCTG GCGTATCTAC GCCGCTAGAA AATGTCTCTT TATATAACTT AAAGCAACTT
GGCTGGAGTC CGTTTTTTCA GCAACAGCTG ATTGAAACTC AAGAGTACGC AAGTGTAGCT
AGAGTGAGTG CTCATCACCG TAGTCAGTAT CAATTACTCA CAGAAAGCGG CGAATCGACA
CTTACAATCC ATCAAAACAT GCCAGAAATG ACGGTCGGTG ACTGGTTACT GTTAGACAGT
CAGCAGCAAT TTGTTGCTGT ACTTGAACGC AGCGCGTTGT TTAGTCGAAA GGCTGCGGGT
TCTAAGGTCG AGCAGCAACT TATCGCAGCG AATCTTGACT GGGTATTTAT CGTATCGTCA
CTCAACGATG ACTTTAACAT TAATCGCATC GAGCGCTACT TGGCACTGGT CCACGAAGCG
AAAGTCACAC CCGTTATCGT ACTGACAAAA GTCGATTTAT GTGATGATCT TACGCCCTAC
ATAGAAGCGC TAAGAGAGTT GGATGCAAGC TTACTCATCG AAACCGTTAA CGGACTAGAT
GAGCAAAGCA CTCGGGCGCT ATCGAGTTAT TGCGTTGACG GTAAAACCGT GGCATTTATC
GGCTCTTCAG GTGTGGGGAA ATCCACGCTA GTTAACGCTC TATTAGGCGA CACCAGTCAG
TTAACATCGG CAATTCGCCA AGACGATAGT AAAGGGCGAC ATACCACCAC TAGCCGTTCA
CTGCATTTAA CTCAAAGCGG CGGGCTATTG CTAGACACAC CAGGTATGCG CGAGCTACAA
CTAGCCGATT GCGAAGAGGG ACTCAACGAG ACCTTTGCCG ATCTTGTTGA ATACTCGCAG
CAGTGCCGTT TTATCGACTG TCAGCATGAG CAAGAACCCG GCTGCGCCGT ACAAGCTGCA
ATTGAAAATG GCCAGCTAAC TGAGCGGCGC TTACAAAGCT TTCAAAAGCT GATGCGGGAG
CAGGCATTAA ATGGCGCCAG TATTGCCGAG AAACGAGCAA AAGATAAAAA CTTAAGCAAG
ATGTACAAGC GAGTTCAGGG CGAGGCTCGA GTACATAAAC GAGGATAA
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| Protein sequence | MTKSNRFNHL KSSTLSRTTS SASTCSSSKS SAASSTTSIE INSGVSTPLE NVSLYNLKQL
GWSPFFQQQL IETQEYASVA RVSAHHRSQY QLLTESGEST LTIHQNMPEM TVGDWLLLDS
QQQFVAVLER SALFSRKAAG SKVEQQLIAA NLDWVFIVSS LNDDFNINRI ERYLALVHEA
KVTPVIVLTK VDLCDDLTPY IEALRELDAS LLIETVNGLD EQSTRALSSY CVDGKTVAFI
GSSGVGKSTL VNALLGDTSQ LTSAIRQDDS KGRHTTTSRS LHLTQSGGLL LDTPGMRELQ
LADCEEGLNE TFADLVEYSQ QCRFIDCQHE QEPGCAVQAA IENGQLTERR LQSFQKLMRE
QALNGASIAE KRAKDKNLSK MYKRVQGEAR VHKRG
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