Gene Spea_1218 details

Gene Information

• Locus tag: Spea_1218
• ID: 5661617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1483957
• End bp: 1484541
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641235780
• Product: putative lipoprotein
• Protein accession: YP_001501080
• Protein GI: 157961046

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCGAC TAAATAAACT TAAGCTTGCA GTAGTGGCTT TACCTGTATT ACTAGTTGGT 
TGTGCGACAG GTGATACCCC AGAAGCTAAG AAGATGCATG CCAGAGAAGA GACACAAGCA 
GCGCTACAGG AGATCTATAC CGAGCATCCA GCGGCTAAGA CGGCTGTTTC AAGTTCGGTT 
GGCTATGTTG TTTGTACTGG TAGTAATAGT TATCTGTTTG CCTTATCGAC TGGTGGTGGC 
ATTTGTGTGC TGCATGAAGG CAGCAAGCTT TCTTACTACC GCTTTGCAAC CGGTGGTGTT 
GGCGCGGGTA TTGGTTGGAA GCAGATGGCG TTTGTACAGG CGTTTACTCA GCGTGATGCA 
TTGACTCGTT TTAAAGAGTC GGGATATGAG GGCCAAGCTC AGGCTGAAGC GAGCGCCGAA 
TATGAAGGCA GTGGTGAGCA AGCATCGGCA AACCAGTCAG TTGATGTGTC TGGTGTGAAG 
ACCTATCAAG TTAACTTGAT GGGCGCGGCA GCTCAGGCAA CCGTACAGGG CTACAAGTAT 
TGGCAAACTG ACTTTAGCGA TGATTTCGTT GAAAACGATG GCTAA 

 

Protein sequence

MFRLNKLKLA VVALPVLLVG CATGDTPEAK KMHAREETQA ALQEIYTEHP AAKTAVSSSV 
GYVVCTGSNS YLFALSTGGG ICVLHEGSKL SYYRFATGGV GAGIGWKQMA FVQAFTQRDA 
LTRFKESGYE GQAQAEASAE YEGSGEQASA NQSVDVSGVK TYQVNLMGAA AQATVQGYKY 
WQTDFSDDFV ENDG