| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1196 |
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| Symbol | alaS |
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| ID | 5661595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1452516 |
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| End bp | 1455143 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235748 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001501058 |
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| Protein GI | 157961024 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00838926 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAA CCACTGCAGC ACTGCGAAGT GCTTTTTTGG AATATTTCCG CACAAATGGT
CACCAGGTAG TAGATAGCAG CTCTCTCGTT CCAGCGAACG ATCCAACGCT ACTATTTACT
AATGCGGGTA TGAACCAGTT TAAAGATGTG TTTTTGGGTG CAGATAAACG TAGCTATTCT
CGTGCAACGT CTTCACAGCG CTGTGTTCGC GCGGGTGGTA AGCACAACGA CTTAGATAAC
GTGGGCTACA CAGCACGTCA CCACACTTTC TTTGAAATGT TAGGTAACTT TAGCTTTGGT
GATTATTTTA AAGAAGAAGC AATTCATTTC GCATGGACTT TCCTGACCGA AGAGTTGAAG
CTACCGAAAG AACGCCTTTG TGTCACCATC TATGACACAG ACGACGAAGC ATTTGAAATT
TGGAATAAGA AAATTGGCGT AGCGGCGGAA AATATTATCC GTATTGGCGA CAATAAAGGT
GCTGCATATG CGTCAGATAA CTTCTGGCAA ATGGGTGACA CAGGTCCTTG TGGCCCATGT
TCTGAAATCT TCTATGATCA CGGTGATCAT ATCTGGGGCG GACGTCCTGG TACACCAGAA
GAAGATGGCG ACCGTTTCAT CGAGATCTGG AACATCGTAT TTATGCAGTA TAACCGTCAA
GCTGACGGTG AGATGAAGCC ACTACCAAAG CCATCTGTTG ATACCGGTAT GGGTATTGAG
CGTATTGCTG CCATTATGCA GGGCGTACAT TCAAACTACG AAATTGATAT TTTCCAAGCT
TTGATCAAGA AGGCTGCAGC TATTCTTGGT GTAACGGATC TTGAGAACAA GTCATTACGT
GTTATTGCCG ATCACATTCG TTCATGTGCC TTCTTAATTG CCGACGGTGT TATGCCATCA
AATGAAGGCC GTGGTTATGT GCTTCGTCGT ATAATTCGTC GTGCCGTTCG TCATGGTAAC
AAGCTAGGTG CTACTGAAAG TTTCTTCTAC AAGCTGGTTC CAACATTAAT TGAAGTGATG
GGCGCCGATG CTGCAAAAGG CTTGCAAGAG ACTCAAGCTA TTGTTGAAAA GTCACTAAAA
GCTGAAGAAG AACAATTCGC ACGTACACTT GAACGTGGTC TAGGCATTTT AGATGCGGCG
CTAAATGAGC TAGCAACTAA TGTGTTAGAT GGCGAAACAG CATTCAAGCT TTACGATACT
TATGGCTTCC CAGTAGATTT AACTGCTGAC GTTTGTCGTG AGCGTGATAT CACGGTTGAT
GAAGCAGGAT TTGAAGTTGC TATGGCAGCG CAGCGTAGCC GTGCACAAGC AGCTGGTCAA
TTCGAGACTG ACTATAACGA AGGTCTTATA ATTGATGAAC AAAGCGGCTT TACTGGTTAC
ACCGATCTAA ATAATCAAGC GACAGTGACA GCAATCTTTA AAGCGGGTGA GTCAGTTGAT
AGCATTGTTG CTGGTGATGA CGTGGTTATC GTACTCGATA ACACACCGTT TTATGGTGAG
TCAGGTGGTC AATGTGGCGA TGAAGGTGTA TTGATTGCCG ATGGAATCGA GTTCACTGTG
ACTGATACAC AAAAGTATGG TCAAGCGATT GGTCATATCG GTCGCGTAGC GACTGGTACA
GTTAAAGTTG GCCAAGTGGT TACAGCGAAT GTTGATAAGA AGCTTCGTCA TAGAACCGAG
CTAAACCATT CAGTGACACA CCTTTTACAT GCAGCGCTTC GCCAAGTGTT AGGTACACAC
GTATCTCAGA AAGGTTCTTT GGTTGACCCA GAGCGTCTAC GTTTCGACTT CTCTCATTTC
GAAGGTGTTA AAGCTCACGA GCTTAAAGAA GTTGAAGAGC TAGTGAATAC CCAAATTCGT
CGTAACCACG AATTGACCGC TGAAGTGATG GATATAGAAA CGGCCAAAGA AAAAGGTGCT
ATGGCACTGT TTGGTGAGAA GTATGATTCA GAAGTGCGTG TTGTGACTAT GGGCGACTTC
TCTATCGAGC TTTGTGGGGG TACTCACGTT GGGCGTACTG GTGATATCGG TTTGTTCAAG
ATCACTTCAG AGGGCGGTAT CGCTGCCGGC ATACGTCGTA TTGAAGCGGT AACAGGCGCA
GCTGCGATGG CTTATGTTGC TAAGCAGCAA GCACAACTTG AAGAAGCGGC TGCATTACTG
AAGGGCGATA GTGCTTCTGT GGTTGCTAAG CTTAAAGCAC AGCTTGATAA GACTAAGTTA
CTTGAAAAAG AGCTATCTCA ACTAAAAGAC AAGTTGGCAG CTGCGACTAG CGCCGATCTT
GCTGGCGAAG CTGTTGACGT GAATGGCGTT AAGGTTCTCG TTAAGAAACT TGAGGGTGTT
GATGCTGGGG CTCTTCGTGG TCTACAGGAT GAGCTCAAGC AAAAGCTGCA GTCAGGTATC
GTAGTGCTAG CGATTGCCGG CGAAGATAAA GTTAATATGA TCGTTGGTGT GACTAAAGAT
CTTACTGGTA AGGTTAAAGC GGGTGAGCTT GTAGCCTCTA TAGCAGTACA AGTTGGCGGT
AAAGGCGGTG GACGTCCTGA TATGGCTCAA GCCGGTGGTA GCCAGCCTGA GAACCTAGAC
GCTGCTTTAG AGCAAGTTAT TCCATGGATC TCTGCTAAGC TTGCATAA
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| Protein sequence | MYQTTAALRS AFLEYFRTNG HQVVDSSSLV PANDPTLLFT NAGMNQFKDV FLGADKRSYS
RATSSQRCVR AGGKHNDLDN VGYTARHHTF FEMLGNFSFG DYFKEEAIHF AWTFLTEELK
LPKERLCVTI YDTDDEAFEI WNKKIGVAAE NIIRIGDNKG AAYASDNFWQ MGDTGPCGPC
SEIFYDHGDH IWGGRPGTPE EDGDRFIEIW NIVFMQYNRQ ADGEMKPLPK PSVDTGMGIE
RIAAIMQGVH SNYEIDIFQA LIKKAAAILG VTDLENKSLR VIADHIRSCA FLIADGVMPS
NEGRGYVLRR IIRRAVRHGN KLGATESFFY KLVPTLIEVM GADAAKGLQE TQAIVEKSLK
AEEEQFARTL ERGLGILDAA LNELATNVLD GETAFKLYDT YGFPVDLTAD VCRERDITVD
EAGFEVAMAA QRSRAQAAGQ FETDYNEGLI IDEQSGFTGY TDLNNQATVT AIFKAGESVD
SIVAGDDVVI VLDNTPFYGE SGGQCGDEGV LIADGIEFTV TDTQKYGQAI GHIGRVATGT
VKVGQVVTAN VDKKLRHRTE LNHSVTHLLH AALRQVLGTH VSQKGSLVDP ERLRFDFSHF
EGVKAHELKE VEELVNTQIR RNHELTAEVM DIETAKEKGA MALFGEKYDS EVRVVTMGDF
SIELCGGTHV GRTGDIGLFK ITSEGGIAAG IRRIEAVTGA AAMAYVAKQQ AQLEEAAALL
KGDSASVVAK LKAQLDKTKL LEKELSQLKD KLAAATSADL AGEAVDVNGV KVLVKKLEGV
DAGALRGLQD ELKQKLQSGI VVLAIAGEDK VNMIVGVTKD LTGKVKAGEL VASIAVQVGG
KGGGRPDMAQ AGGSQPENLD AALEQVIPWI SAKLA
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