Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1163 |
Symbol | |
ID | 5661562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1408714 |
End bp | 1409379 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235715 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_001501025 |
Protein GI | 157960991 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000497127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTG GGATTATTGA ATCAGTCGGA CACCTACGAA AAGTTGAGCG TCGCGGCGAT GATATTCGCT TAACGGTAGC CAGTGGTAAA CTGGATCTGT CAGACGTAAA ACTGGGTGAC AGTATCGCCA CCAATGGTGT GTGCCTAACA GTGGTTGAGC TGATGAGCGA CGGTTATGTG GCAGATATTT CTGCAGAAAC TGTCACTTTG ACGGGCTTCT CTCATTATCA AGTAGGAAAA GCCGTTAACC TTGAGAAGGC CGTGACCCCT ACAACTCGTT TAGGCGGGCA TATGGTCAGT GGTCACGTAG ATGGTATCGC TCATGTGGAT GATAGACAGT TTCGTGGCCA AGCCATCGAA TTTTGGCTAA GCCCACCTGA GGAACTTGGC CGTTATATCG CCCATAAAGG TTCGATTACC ATCGATGGTG TGAGTTTGAC GGTTAATGAG GTGCAAGGTC ATCGTTTTAG ACTGACTATC GTGCCGCACA CCGCAGGCGA AACCACTTTA GTGAATCTGA AAGCCGGTGA TAGCGTGAAT ATTGAAGTGG ACTTGATTGC ACGTCACTTA GAAAGGTTGA TGAGCTACGG CAGCCAAGAG CAAGACAGCG CTCCTAAGTC GGAAGTGACG ATGGAACTGT TAGCTCGCTC AGGATTTTTA CGATAA
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Protein sequence | MFTGIIESVG HLRKVERRGD DIRLTVASGK LDLSDVKLGD SIATNGVCLT VVELMSDGYV ADISAETVTL TGFSHYQVGK AVNLEKAVTP TTRLGGHMVS GHVDGIAHVD DRQFRGQAIE FWLSPPEELG RYIAHKGSIT IDGVSLTVNE VQGHRFRLTI VPHTAGETTL VNLKAGDSVN IEVDLIARHL ERLMSYGSQE QDSAPKSEVT MELLARSGFL R
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