| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1160 |
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| Symbol | glyA |
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| ID | 5661559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1405628 |
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| End bp | 1406884 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235712 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001501022 |
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| Protein GI | 157960988 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000110651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAA AAGATATGAA TATCGCGGAT TATGATCCAC AACTATTTGC AGCAATTGAA
GATGAAACGC GCCGTCAAGA AGAGCACATC GAACTTATTG CTTCAGAAAA CTACTGTAGT
CCTCGCGTAA TCGAAGCACA AGGTACTCAG CTTACTAACA AGTATGCTGA AGGCTACCCA
GGTAAGCGTT ACTATGGTGG TTGTGAGCAT GTAGATATTG TTGAAGAGTT AGCAATTTCT
CGTGCTAAAG AACTATTTGG CGCGACTTAT GCCAACGTTC AGCCACACTC AGGCTCTCAA
GCTAACGCAG CCGTATTTAT GGCACTACTT CAAGGCGGCG ACACGGTTCT AGGTATGAGC
CTAGCACACG GTGGTCACCT AACTCACGGC TCTCACGTGA GCTTTTCAGG CAAACTATAC
AACGCAGTTC AGTATGGTAT CGACGAAACA ACAGGCCAGA TTGACTACGC CGAAGTTGAG
CGTCTAGCCG TTGAGCACAA GCCAAAGATG ATCATCGCAG GTTTCAGTGC CTACTCAGGT
ATCATCGACT GGGGTAAGTT CCGCGAAATC GCTGACAAAG TTGGCGCATA CCTATTCGTT
GATATGGCGC ACGTTGCAGG TCTTGTTGCT GCAGGTATCT ATCCAAACCC AATGCCACAC
GCGCACGTTG TAACAACAAC GACTCATAAG ACGCTAGCTG GTCCACGTGG CGGTTTGATC
CTTTCATCAA TCAATGATGA AGATATCTAC AAGAAGCTAA ACTCTGCAGT ATTTCCAGGC
GGCCAAGGCG GTCCTTTGAT GCACGTTATT GCTGCTAAAG CAGTTGCATT TAAAGAAGCC
CTAGACCCAG AGTTCACGAC TTATCAAGAG CAAGTAGTTG TTAACGCAAA GGCAATGGCT
CGTACGTTTA TCGAACGTGG CTATAATGTA GTTTCTGGTG GTACTGATAA CCACCTATTC
TTGCTTGATT TGATCAGTAA AGACATCACA GGTAAAGATG CTGACGCGGC CCTAGGCAAC
GCTAACATCA CAGTGAACAA GAACTCAGTA CCGAACGATC CACGTTCACC ATTTGTGACT
TCAGGTCTAC GTATCGGTTC TCCTGCAATC ACGCGTCGTG GTTTTGGTGA GGAAGAGAGC
GTGCAGTTAA CTCACTGGAT GTGTGATGTA CTGGATGATA TTTCAGATCT AGCCGTTAGC
GAGCGCGTTA AAGGACAGGT TCTGGAATTG TGCGCTAAGT TCCCTGTTTA CGGTTAA
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| Protein sequence | MLKKDMNIAD YDPQLFAAIE DETRRQEEHI ELIASENYCS PRVIEAQGTQ LTNKYAEGYP
GKRYYGGCEH VDIVEELAIS RAKELFGATY ANVQPHSGSQ ANAAVFMALL QGGDTVLGMS
LAHGGHLTHG SHVSFSGKLY NAVQYGIDET TGQIDYAEVE RLAVEHKPKM IIAGFSAYSG
IIDWGKFREI ADKVGAYLFV DMAHVAGLVA AGIYPNPMPH AHVVTTTTHK TLAGPRGGLI
LSSINDEDIY KKLNSAVFPG GQGGPLMHVI AAKAVAFKEA LDPEFTTYQE QVVVNAKAMA
RTFIERGYNV VSGGTDNHLF LLDLISKDIT GKDADAALGN ANITVNKNSV PNDPRSPFVT
SGLRIGSPAI TRRGFGEEES VQLTHWMCDV LDDISDLAVS ERVKGQVLEL CAKFPVYG
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