Gene Spea_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1158 
Symbol 
ID5661557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1402275 
End bp1403432 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content45% 
IMG OID641235710 
Productacyltransferase 3 
Protein accessionYP_001501020 
Protein GI157960986 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00977171 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATA AAGCGAGCCC CTCTCAGGTG AATCACAGTT CCGTAAGTGA TGCCTCGTCG 
AGTGAGATAC AAACAGCGGC GGCAGCCACA ACAACTCAAG CCCAGCAGAA AAAATCTACC
GGCTTCTTAA ACAGCATCAA CCACTTTCGT GGCATCGCGA TTATCTTTAT CGTCATGGCC
CACTGCTACC GACCTGCAGG CTGGGAGATA GAAACCTTTG CCGACAAGGC TTGGTTTAAT
TTGATGATGA ATGGCACGGT ATTTTTTGTA TTTATCTCAG GCTTTCTGTT CCACCATGTG
TTTTATCATC GCTGGGATTA CAAGAAATAC ATGAAGAGTA AAACCAAATT TGTGTTTTTG
CCCTATCTGC TTCTTTCCCT ACCTTGGATT GTCTGGCACC TGACCGTCGG TACGGATCCT
ATGATGCATC AAGCGCTTGC CAATATCACG GCTCCCGCAC AGGCCGCGAG CTGGTATGTG
ATCACCGGCC GTACGCTTAC CGCATATTGG TATATTCCCA TGGGCATGAT GCTGTTTGCC
TTGTCACCTT GGGTCATGTA CCTCATTAAA AAGCAGCAAA TACTCTACTA CGCCATTCCA
TTGTTATTAA TTGCCATCAT GGTGCATAGA CCGATTTCAA ACCTCAATGC TATCCAATCT
TTAGTCTATT TCTTACCAGT CTATCTTTTA GGCGTTTGGG GATCGGCTCA CCGCGATAAA
CTGTTTCCGT TTATCGATAA ATATTGGATC CCAATGTTTT TTGTGGGTGT TGCCTTGGCA
CTGATTCAAG CCGAATATTT TGGTGCAGGC GTACTCAATA AGGCACCGTT TGAGATGACT
GTGCCTGACT TGATGCTACC GCAAAAGATA TTACTGACCT TAGTCATATT GGCGATTTTA
AATAAGTTTG AGCATATCTC GATAGCGCCT CTGCAAAAAC TGGCCGAGGT CAGCTTTGCC
ATCTACTTTA TTCACCCTTG GATCACGACC CCTTGGTGGA TGATCTATGA TAGCCCGGAT
CTATTGGGTC TAGCCGGTAA AGGCAATATC TTCACTACAC TAATCGTCAC CTTAGTAGTG
GTGGCTATCT CTTACGTAAT CGCGGTAATG ATAAAGAAGA TGCTAAGTAA ACGTAGCCGC
TATCTGATTG GTTGGTAA
 
Protein sequence
MDDKASPSQV NHSSVSDASS SEIQTAAAAT TTQAQQKKST GFLNSINHFR GIAIIFIVMA 
HCYRPAGWEI ETFADKAWFN LMMNGTVFFV FISGFLFHHV FYHRWDYKKY MKSKTKFVFL
PYLLLSLPWI VWHLTVGTDP MMHQALANIT APAQAASWYV ITGRTLTAYW YIPMGMMLFA
LSPWVMYLIK KQQILYYAIP LLLIAIMVHR PISNLNAIQS LVYFLPVYLL GVWGSAHRDK
LFPFIDKYWI PMFFVGVALA LIQAEYFGAG VLNKAPFEMT VPDLMLPQKI LLTLVILAIL
NKFEHISIAP LQKLAEVSFA IYFIHPWITT PWWMIYDSPD LLGLAGKGNI FTTLIVTLVV
VAISYVIAVM IKKMLSKRSR YLIGW