Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1078 |
Symbol | |
ID | 5661477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1305567 |
End bp | 1306340 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641235624 |
Product | hypothetical protein |
Protein accession | YP_001500940 |
Protein GI | 157960906 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0502569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATCT TAGTCTCTCC AGCAAAAACA CTCGATTTTG ACAATCCTCC CGGCAGCGAA AACTATTCAA TGCCAACGTT ACTCGATCAA AGTGAACAGC TGATTGAAGT TTGCCGTAAG TTAACACCGA CTGATGTGGC AACACTGATG AAGGTTAGTG ATAAAATTGC AGGCTTAAAC GTAGCAAGAT TTAGCTCTTG GCAAAAAGAG TTCACTCCGA CGAATGCTAA GCAAGCTGTA TTCGCTTTTC GAGGTGATGT ATACACAGGG CTTGACGCCG ATACTCTTTC GCCACAGAGC TTGGATAGGG CCCAGCAGCA GTTGCGGATC CTGTCGGGTC TATATGGTTT GCTTAAACCT CTGGATTTAA TGCAGCCCTA TCGTTTGGAG ATGGGCACTC GTTTGGCGAA TGAGCGAGGC ACAAACCTCT ATCAATTCTG GGGCGATATC ATCACTGATG AGTTAAACCA AACGACGGCA GAGCAGGGGA GTGAGTTTAT TATTAACCTC GCGTCAAATG AATACTTTAA AGCGGTTAAG CCTAAAAAAC TAAACGCAGG CTTGATTACT CCAGTGTTTA AAGACTGCAA GAACGGTCAG TACAAAGTGA TTAGCTTCTT TGCCAAAAAA GCTCGTGGCA TGATGGTACG TTATATTTTA GATAATAATG TCGACTCGTT AGAGGCGTTG ACCAAGTTCG ATACAGCTGG TTATTACTAC AGTGAGAAGG ACTCGACAGT GAACGAGCCC GTCTTTTTGC GTGAAGAGCA ATAG
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Protein sequence | MLILVSPAKT LDFDNPPGSE NYSMPTLLDQ SEQLIEVCRK LTPTDVATLM KVSDKIAGLN VARFSSWQKE FTPTNAKQAV FAFRGDVYTG LDADTLSPQS LDRAQQQLRI LSGLYGLLKP LDLMQPYRLE MGTRLANERG TNLYQFWGDI ITDELNQTTA EQGSEFIINL ASNEYFKAVK PKKLNAGLIT PVFKDCKNGQ YKVISFFAKK ARGMMVRYIL DNNVDSLEAL TKFDTAGYYY SEKDSTVNEP VFLREEQ
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