| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0988 |
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| Symbol | |
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| ID | 5661387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1200210 |
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| End bp | 1200917 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235534 |
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| Product | aquaporin Z |
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| Protein accession | YP_001500850 |
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| Protein GI | 157960816 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.505214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGA ACCAAAAAAT GACCGCCGAG TTTATCGGTA CACTTTGGCT TGTCTTAGGT
GGTTGTGGTA GCGCCGTCTT AGCCGCGGCT TTTCCAGAGC TTGGCATAGG CTTTCTCGGG
GTGGCATTTG CGTTCGGTTT GACCGTCCTC ACCATGGCAT TTGCCATAGG ACATATCTCC
GGATGCCATT TAAACCCCGC GGTTTCAATT GGTCTATGGG CGGGCGGACG TTTTCCTGCC
TCTGAATTAC TGCCCTATAT TATCGCTCAG GTAGCAGGCG GTATCGCTGG CGCCAGCATT
TTATATCTTA TCGCCTCGGG GCAAGATGGT TTTAGCCTCT CGGCAGGCTT TGCCTCAAAC
GGCTATGGAG AACACTCCCC CGGAAGTTAT AGCTTAACGG CGGCACTGAT TTGTGAAATC
GTGATGACTC TGTTCTTCTT GCTTATCATT CTTGGCGCTA CCGATTCACG CACTCCGAAA
GGCTTTGCCC CTATCGCCAT TGGTTTAGGG CTTACATTAA TCCACCTAAT CAGCATTCCT
GTAACCAATA CTTCGGTCAA TCCGGCTCGC AGCACGGGGC CAGCACTGTT TGTCGGCGAC
TGGGCTATCT CTCAGCTTTG GCTATTTTGG CTTGCGCCAA TTATTGGTGC GATTCTCGCG
GGCTTGATTT ATAGAGTCTT CGACACTAAA GGTGAATCGT CTATATAG
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| Protein sequence | MNMNQKMTAE FIGTLWLVLG GCGSAVLAAA FPELGIGFLG VAFAFGLTVL TMAFAIGHIS
GCHLNPAVSI GLWAGGRFPA SELLPYIIAQ VAGGIAGASI LYLIASGQDG FSLSAGFASN
GYGEHSPGSY SLTAALICEI VMTLFFLLII LGATDSRTPK GFAPIAIGLG LTLIHLISIP
VTNTSVNPAR STGPALFVGD WAISQLWLFW LAPIIGAILA GLIYRVFDTK GESSI
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