Gene Spea_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0966 
Symbol 
ID5661365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1177265 
End bp1177756 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content44% 
IMG OID641235512 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001500828 
Protein GI157960794 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0113529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA TCTTTATAAG CTTGGGTAGC AATATCGACC CTGAGCGCCA TCTTAAGGCT 
GCTTTAACGG ACCTTCAGGA CCATTTTGGG CCGCTTGAAT TGTCATCTGT GTTTGAAAGT 
GAAGCGGTGG GCTTTGAAGG GACTAACTTT CTTAATATGG TGGTTGCGGC ACAAACCCAG 
TTATCGATAG CTGATGTTGT GAGTCGATTT AAACAGATTG AGCAGCGTCA TGGCCGAGTT 
AAAGGTGCTA AGAAATTTGC CCCAAGAACC TTAGATTTAG ATCTATTGCT GTATGACGAT 
ACCATTAGTG AGCAGCCTAT TGAGTTGCCG AGAGCCGAGA TCTTGTATAA TGCCTTCGTT 
TTATGGCCAT TAGCGGAAAT TGCCCCCACT TTGAACCACC CTGTTGTCAA TCAATCGTAT 
CAAGCCCTTT GGAATGATTA CGATAAGAGT CAACAATCAC TATGGCCTGT TGAGTTTAGC 
TGGTCAGCGT AA
 
Protein sequence
MATIFISLGS NIDPERHLKA ALTDLQDHFG PLELSSVFES EAVGFEGTNF LNMVVAAQTQ 
LSIADVVSRF KQIEQRHGRV KGAKKFAPRT LDLDLLLYDD TISEQPIELP RAEILYNAFV 
LWPLAEIAPT LNHPVVNQSY QALWNDYDKS QQSLWPVEFS WSA