Gene Spea_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0962 
Symbol 
ID5661361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1173970 
End bp1174986 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content50% 
IMG OID641235508 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_001500824 
Protein GI157960790 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00256345 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTTT TAGGTATAGA AACATCCTGT GATGAAACAG GGATTGCGGT TTATGATGAT 
AAAAAGGGCT TGCTGTCGCA TGCGCTTTAC AGTCAGGTTA AATTGCATGC CGACTATGGT 
GGGGTTGTGC CGGAGTTGGC CTCTCGCGAC CATGTTCGCA AAATTGTACC TTTAATACGC 
CAAGCGTTAG CGGATGCTGG CATGACTATC GAGGATATCG ATGGTATCGC TTATACCAAA 
GGTCCTGGAC TGATAGGAGC ACTGTTGGTG GGGGCTTGTG TGGGGCGTGC CTTGGCATTT 
TCATGGGATA AGCCTGCAAT TGGTGTACAT CATATGGAAG GTCACTTGCT AGCTCCTATG 
CTGGAAGATG ACGTACCTGA GTTTCCATTT TTAGCGTTAT TAGTTTCAGG CGGTCACTCC 
ATGATTGTTG GCGTGGAAGG CATTGGGCGC TATACGGTAC TGGGTGAGTC AGTTGATGAC 
GCCGCGGGTG AAGCATTCGA TAAAACCGCT AAGCTGATGG GGCTCGATTA CCCTGGTGGC 
CCAAGGCTTT CTAAGCTTGC CGCTAAGGGA GTGCCAAACA GCTATCGTTT CCCACGTCCA 
ATGACTGACA AACCTGGCCT TAATATGAGC TTCTCAGGCC TTAAAACCTT TGCGGCTAAT 
ACTATTGCGG CCGAGCCAAA AGATGAGCAG ACGCGTGCCA ACATCGCCTG TGCCTTTGAA 
GAGGCGGTTG TCGATACGTT AGCAATTAAG TGTAAGCGTG CTTTAAAGCA AACGGGTTAT 
AAGAACCTAG TGATAGCGGG CGGCGTAAGT GCTAATACTC GACTTCGTTC ATCTTTGGCT 
GAAATGATGC AGGGCCTTGG CGGTAAGGTA TACTACCCGC GTGGTGAGTT CTGTACCGAT 
AACGGCGCAA TGATCGCTTA TGCGGGCCTG CAGCGTCTTA AAGCGGGACA AGTTGAAGGC 
TTGGAAGTAA AAGGGCAGCC AAGATGGCCA CTCGATACGC TAGAGCCTGT AGATTAA
 
Protein sequence
MRVLGIETSC DETGIAVYDD KKGLLSHALY SQVKLHADYG GVVPELASRD HVRKIVPLIR 
QALADAGMTI EDIDGIAYTK GPGLIGALLV GACVGRALAF SWDKPAIGVH HMEGHLLAPM 
LEDDVPEFPF LALLVSGGHS MIVGVEGIGR YTVLGESVDD AAGEAFDKTA KLMGLDYPGG 
PRLSKLAAKG VPNSYRFPRP MTDKPGLNMS FSGLKTFAAN TIAAEPKDEQ TRANIACAFE 
EAVVDTLAIK CKRALKQTGY KNLVIAGGVS ANTRLRSSLA EMMQGLGGKV YYPRGEFCTD 
NGAMIAYAGL QRLKAGQVEG LEVKGQPRWP LDTLEPVD