| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0919 |
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| Symbol | |
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| ID | 5661318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1125070 |
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| End bp | 1126368 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235464 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001500781 |
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| Protein GI | 157960747 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000178347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTGCTCCT GAGATTTTGC GCGCAATCTC TGAATGTGGT
TATGAAAAAA TGACGCCAAT TCAGCAGCAA GCGATCCCTG CCGTTCGTCG CGGTCAAGAT
GTACTTGCTA GTGCTCAAAC AGGCACGGGT AAAACGGCCG CTTTTGCATT GCCTATCTTA
CAAAAGATGT TAGATAACCC AAGCACGACG GGCCGTTCAA ATGCACGCGC TTTGATCTTA
ACCCCGACTC GCGAACTGGC AGCTCAAATT GCCGATAACA TCAATGATTA TGCTAAGTAC
CTAGACTTGA AGGTCGTCAC TGTATATGGC GGCGTGAAGA TGGATAGTCA GGCGACTAAA
TTAAAACGCG GCGCCGATAT CATTATCGCG ACACCTGGCC GCCTGCTTGA GCATATTATT
GCCTGTAACT TAAGCCTGTC TAACGTTGAC TTCTTAGTCC TAGACGAAGC CGACCGTATG
CTAGATATGG GTTTTAGCGC CGATATCCAA AAAATTCTGC AAGCCGTTAA TAAGAAACGT
CAGAATCTAT TATTCTCGGC AACCTTCTCT ACAGCGGTTA AACAGCTTGC TAACGAGATG
ATGGTTAAAC CAAACGTGAT TGCTGCTGAC AAGCAAAACA CCACTGCGAT TACAGTAAGC
CAAGTTGTTT ACCCTGTAGA ACAGCGCCGT AAGCGCGAAC TATTATCTGA ACTAATCGGC
AAGAAGAACT GGCAACAAGT GCTAGTATTT ACTGCCACCC GTGATGCTGC AGACAAGCTT
GAAAAAGAGC TAAATCTAGA TGGTATTCCA ACTGCCGTTG TTCATGGTGA GAAGGCACAA
GGTAGCCGTC GCCGTGCACT ACGTGAGTTT AAAGAAGGTA AGATGCGCGT ATTAGTGGCA
ACCGAAGTTG CTGCGCGTGG TCTAGATATT CAAGGCTTAG AGTACGTAGT GAACTACGAC
TTACCTTTCC TAGCTGAAGA CTATGTGCAC CGCATTGGCC GTACTGGTCG TGCAGGTAAG
TCTGGCGTAG CCATCTCTTT TGTTAGCCGA GAAGAAGAGC GTACCTTAGC TGACATCGAG
AAGTTAATCG GTCAGCAGCT TCGCCGTATC AGCATTCCTG GTTATGAAGT GGGTAGCCGC
GATCTGCTTA TCAAGCAACT ACAGAGTCGT CGTAGCTTTG CCAAGAAACA ACAGCGTGTC
GATAATGCTG GCGCTCAGAT GATTGCAGAG AAAAACATGC AAGGCCGCCG CGTCAAAGTG
AAAAACTCAT CACAGGCAAA AATTAAGAAG ATAAAATAA
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| Protein sequence | MRFESFSFAP EILRAISECG YEKMTPIQQQ AIPAVRRGQD VLASAQTGTG KTAAFALPIL
QKMLDNPSTT GRSNARALIL TPTRELAAQI ADNINDYAKY LDLKVVTVYG GVKMDSQATK
LKRGADIIIA TPGRLLEHII ACNLSLSNVD FLVLDEADRM LDMGFSADIQ KILQAVNKKR
QNLLFSATFS TAVKQLANEM MVKPNVIAAD KQNTTAITVS QVVYPVEQRR KRELLSELIG
KKNWQQVLVF TATRDAADKL EKELNLDGIP TAVVHGEKAQ GSRRRALREF KEGKMRVLVA
TEVAARGLDI QGLEYVVNYD LPFLAEDYVH RIGRTGRAGK SGVAISFVSR EEERTLADIE
KLIGQQLRRI SIPGYEVGSR DLLIKQLQSR RSFAKKQQRV DNAGAQMIAE KNMQGRRVKV
KNSSQAKIKK IK
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