| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0903 |
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| Symbol | |
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| ID | 5661302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1103801 |
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| End bp | 1105090 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235448 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001500765 |
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| Protein GI | 157960731 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTGC CGTTATTAGC CCACATTATG AAATTTTCCG ACCTTAATCT TTGTGCCGAA
ATCCTATCTA AACTACCCAG TAAGCTGATT GTCGCCACCG ACATCCAACG ACTTGCTATC
CCTCAAATTT TAGCGGGCAA AGATCTGCTA GCGCTAGCAC AAACCGGCAG TGGTAAAACT
TATGCCTTTG GTTTGCCACT GCTACAAAGC AATATCAATG GTAATAGTGA CTCGGGAGAG
GTTAAGGCGC TGGTGTTAGT GCCCACTCGC GAACTGGCAC TGCAAGTCGG TGAGGCGCTA
GAGTCTGTGT CTGATAGCAC TGGGATAATC GTATTGTGCG GTGGTGTAGA TAAGGAAGAG
CAGGTTAAAA CGCTGCAGCA GGCAAGATTA CAGTTAAAGC CACAACTTGT GGTGGCAACG
CCTGGCAGGT TATTAGATCT GTTACGTGAG CAACAACTCT CACTTGAGTC GGTAAAACAG
CTAGTACTCG ATGAAGCGGA TAGGTTGATG GAGATGGGCT TTTGGCCTGA TCTTGAGCGC
ATACTCGAGT TTATCCCAAG CAAACGACAG ACCATGTTAT TTTCGGCGAC GCTGGCACCA
GAGCTAAACG AAAAGGCGCT TGGCTTGTTA CGCGCGCCAG TTAAGGTTGA GGCGCACGCG
GCTAATAGCG TGGTGACTGA TATTAGCGAA TCGCTTTACT TGGTCAATAA AGGCGATAAA
GCCCGGGCGT TAATCGCACT TATTCAAAAG AATCAATGGT CACAGGTACT GGTGTTTATC
AATGCAAAAG ATGACGCCGA TAAACTTGCT AAGCGGTTAG TAAAGGCGGG CATCAATGCC
GCCGCTTTGC ACGGCGATAA AGAGCAACTT GATAGGCAGC AAACATTAGC CGACTTTAAA
GCGCTTAAAT TACCGGTTTT GGTCACCACA GATCTATTGT CTCGCGGTAT TCATGTCGAC
GCCCTGCCAG TTGTAATCAA TCTGGATTTA CCTAATAGCG CCCCGGTATA TGTACACCGT
ATTGGCCGTA CAGCTCGAGC CGGTGATAAG GGGTTAGCGA TCTCACTGGT GTGTCATGGC
GAAGCCGATA GCTTAAAGGC GATTCAACAG CTAACCGAGC GAGAGCTAAA GCTTGAGGCT
CTCGAGGGGT TCGAAGTAAC CGATAAGCCG TCATCGGGCG ACAGTAAACG TGCTCCCCGT
GATAAGAAAG CCAATCGACG CAGCCAGAGT AAGCGCAGCG CTAAAGATTT TGCCCCTAAA
CAGGCTGCTA AAAAGCCAAG ACGAACATAA
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| Protein sequence | MQLPLLAHIM KFSDLNLCAE ILSKLPSKLI VATDIQRLAI PQILAGKDLL ALAQTGSGKT
YAFGLPLLQS NINGNSDSGE VKALVLVPTR ELALQVGEAL ESVSDSTGII VLCGGVDKEE
QVKTLQQARL QLKPQLVVAT PGRLLDLLRE QQLSLESVKQ LVLDEADRLM EMGFWPDLER
ILEFIPSKRQ TMLFSATLAP ELNEKALGLL RAPVKVEAHA ANSVVTDISE SLYLVNKGDK
ARALIALIQK NQWSQVLVFI NAKDDADKLA KRLVKAGINA AALHGDKEQL DRQQTLADFK
ALKLPVLVTT DLLSRGIHVD ALPVVINLDL PNSAPVYVHR IGRTARAGDK GLAISLVCHG
EADSLKAIQQ LTERELKLEA LEGFEVTDKP SSGDSKRAPR DKKANRRSQS KRSAKDFAPK
QAAKKPRRT
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