| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0836 |
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| Symbol | |
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| ID | 5661235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1035910 |
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| End bp | 1037121 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235381 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001500698 |
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| Protein GI | 157960664 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0293971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAATG CAGAGAATCT TTGCGTAGAG AGTGTGATGA AACGTTCAAT TCTGCTACTA
ATTCTGCAAC TAACCCTATG CACGCTGCTA GTGAGTGGCT GCGCAAGCCA GGGTCTTAAA
ACGTCTGATG ACTTAACTGT TTATTTTCAT GATGAGTACT TTAGCCCTGC TCAAGAACTA
CCTGATGCCG ACACGCTATT TGAACTGCCC GAAGACGCGC TGAACTCGCT TCGAAGGGAG
TTGACTCGTT CAAAGGGCTA CCAACATCAA TCTAAGGTTA TGTTGCATGA GTGGTTAGCT
AATTACATCA ATGCGGCGGA TGGCGGCTTT CGCTATGCCG ATAACGTCAC GCGAAGCGCG
AGGGATACCT TCGATGATAG AGAGGGTAAT TGTTTGTCAT TAGTGGTATT AACGGCGGCT
TTGGCAAAGG AGTTAGCAGT TAAGGTAGAG TTTCAAGAGA TTGATATTCC GCCCGTGTGG
GATAGGCAAG GTGGCTTCTA TCTTGTTAAT GGTCATATTA ACCTTAAACT TCTGCCTCAA
GATAAAGGCA ATGTCTTCAA TATCTCGACC CAATCGATTC AAATTGACTT CTTACCAGAA
CGAGCCATGC AGGGCTATCA AAAGCGTCGA GTGAGCAGAG CGATTGTCGT CTCCATGTTC
TATAACAATA TAGCGGCCGA AGCGCTTGTT GAAGGGAATT ATGATCGCGC CTATGGGCTG
TTAAAGCTTG CACTTAAGCA AGAGGAATTG TTTTTACCTG CGCTAAATAC CTTAGCCGTC
CTCTACCGAT ATAAAGGATT AGATCAGCAA GCTGAGGTTT TGTATAAATA TGTATTGAGT
GTGCAGCCTG AAGATATGAA TGCCCTTAAT AACTACGCCA TCATGTTATC GGCACAAGAT
CGCTTAGATG AATGGAGTGA TGTGCATAAG GTGATGGAGC TGGCACGTAT TCGCAACCCT
TATTACTACT ACGGTATGGC ACAGCAGGCT TACTTCGATA AAGAATATCA GGATGCACTC
ATCTGGTATA AGAGGGCAAT TGCAAAAGCC GATTATCGCC ACGAATTCTA TTTTGGTCTG
TCTCGTACTT ATTGGGTCAC CGGGGATCTA AGTCGCGCTG AGCAGAGTTT AGAGAAAGCG
CTTAAGCTAA CGACCGATGA ACATAATAAA CGCCGTTATC AGGCTAAACT ACATGCCATG
AGAAGTCATT AA
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| Protein sequence | MLNAENLCVE SVMKRSILLL ILQLTLCTLL VSGCASQGLK TSDDLTVYFH DEYFSPAQEL
PDADTLFELP EDALNSLRRE LTRSKGYQHQ SKVMLHEWLA NYINAADGGF RYADNVTRSA
RDTFDDREGN CLSLVVLTAA LAKELAVKVE FQEIDIPPVW DRQGGFYLVN GHINLKLLPQ
DKGNVFNIST QSIQIDFLPE RAMQGYQKRR VSRAIVVSMF YNNIAAEALV EGNYDRAYGL
LKLALKQEEL FLPALNTLAV LYRYKGLDQQ AEVLYKYVLS VQPEDMNALN NYAIMLSAQD
RLDEWSDVHK VMELARIRNP YYYYGMAQQA YFDKEYQDAL IWYKRAIAKA DYRHEFYFGL
SRTYWVTGDL SRAEQSLEKA LKLTTDEHNK RRYQAKLHAM RSH
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