Gene Spea_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0818 
Symbol 
ID5661217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1015117 
End bp1016256 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content48% 
IMG OID641235363 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001500680 
Protein GI157960646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.823594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATA CAAGTACCAA AACAAACAGG GTCAAACTAG CAAGCTTTAA CCTGTTTAAT 
TACATTGAAC CGCCTTTAGC CTATTACGAT TTTGAAAATA TCTATAGCGC AGAGCAATGG
CAAAAAAAGC AGTCTTGGTT AGCTGAGTTT TTAGCGCAGC ACCAGCCGGA TATTATTGGC
TTTCAAGAGG TGTTTTCAGC GTCTGCATTG GATGAACAAA TGCACGCTGC TGGCTATGAG
CATTTTGCCA CAGTTGGTGA ACCCACCGTG ATTGACGATT ATATTTGCCG CGACCCGGTT
GTGGGCCTTG GCTCAAAATT TCCGTTCACA GAGGTCACCG CGATTGAAGC AGAGGCTGAA
TATATTCACG CGCTTGGGCT AAACCCGAAC TTTGCATTTA GCCGCAAACC ACTTCGTGCC
ACAGTTCAAT TACCGCTGAT TGGCCTTTGC GATATTTACG TGGTGCACTT TAAATCTAAG
CGCCCGCATC TGGATGAGTT GCCAGCAGCC AAGTTTGTTC AGTCAAAGGT TACTCAAGCA
ACAAATGCCT CGTCGGCAGC TTTGGTTAAT TTTGGTGAGC TATTAGGGCG TAACAGCCTT
GGCCAATGGG CATCGAGTAT TCAGCGCGGC AGTGAGGCGG CGTTACTGTT TCATGCCATG
CTGCAAAGAC GCATAGAGAC CAATCAGCCG ATGATATTAA TGGGCGACTT TAATGAAGAG
CTGACAAGCT CGGTATTATC GCCGTTAACT AACCGCGAGC TGCGTTTTGA AAAAGAGGGG
CTAGGTCAGT TAGCGAATTT TCCGCTAACC GATGCTTATA AGCTGTTTCA GCAAGGTTTA
CAGGACTTGT TTGGCGTTAA GGCAACAGAT TCAAGCCTTG ATGAAATTGC TGCGGAAGAA
GAGCGAATGC TTGCCAAAGC GCGGGCATCG CGCGCGCCGA CTCATTACTA CGGCGCCAGC
GGTAATGTGC TGGATTACAT TTTATTGTCG GCAGACTTTG ATCCAAGCTT TGATAATAGC
GTTGCCGAGG TTTGTGACTA TCACACCGAA GACAGGCACT TAGTGAACCC AAGCTTTGAG
CGTGATAGCC AAAGTAGCGA CCACGCGCCG GTTACTTGCA CCTTACGCAT TAGGCGCTAA
 
Protein sequence
MANTSTKTNR VKLASFNLFN YIEPPLAYYD FENIYSAEQW QKKQSWLAEF LAQHQPDIIG 
FQEVFSASAL DEQMHAAGYE HFATVGEPTV IDDYICRDPV VGLGSKFPFT EVTAIEAEAE
YIHALGLNPN FAFSRKPLRA TVQLPLIGLC DIYVVHFKSK RPHLDELPAA KFVQSKVTQA
TNASSAALVN FGELLGRNSL GQWASSIQRG SEAALLFHAM LQRRIETNQP MILMGDFNEE
LTSSVLSPLT NRELRFEKEG LGQLANFPLT DAYKLFQQGL QDLFGVKATD SSLDEIAAEE
ERMLAKARAS RAPTHYYGAS GNVLDYILLS ADFDPSFDNS VAEVCDYHTE DRHLVNPSFE
RDSQSSDHAP VTCTLRIRR