Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0818 |
Symbol | |
ID | 5661217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1015117 |
End bp | 1016256 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235363 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_001500680 |
Protein GI | 157960646 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.823594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAATA CAAGTACCAA AACAAACAGG GTCAAACTAG CAAGCTTTAA CCTGTTTAAT TACATTGAAC CGCCTTTAGC CTATTACGAT TTTGAAAATA TCTATAGCGC AGAGCAATGG CAAAAAAAGC AGTCTTGGTT AGCTGAGTTT TTAGCGCAGC ACCAGCCGGA TATTATTGGC TTTCAAGAGG TGTTTTCAGC GTCTGCATTG GATGAACAAA TGCACGCTGC TGGCTATGAG CATTTTGCCA CAGTTGGTGA ACCCACCGTG ATTGACGATT ATATTTGCCG CGACCCGGTT GTGGGCCTTG GCTCAAAATT TCCGTTCACA GAGGTCACCG CGATTGAAGC AGAGGCTGAA TATATTCACG CGCTTGGGCT AAACCCGAAC TTTGCATTTA GCCGCAAACC ACTTCGTGCC ACAGTTCAAT TACCGCTGAT TGGCCTTTGC GATATTTACG TGGTGCACTT TAAATCTAAG CGCCCGCATC TGGATGAGTT GCCAGCAGCC AAGTTTGTTC AGTCAAAGGT TACTCAAGCA ACAAATGCCT CGTCGGCAGC TTTGGTTAAT TTTGGTGAGC TATTAGGGCG TAACAGCCTT GGCCAATGGG CATCGAGTAT TCAGCGCGGC AGTGAGGCGG CGTTACTGTT TCATGCCATG CTGCAAAGAC GCATAGAGAC CAATCAGCCG ATGATATTAA TGGGCGACTT TAATGAAGAG CTGACAAGCT CGGTATTATC GCCGTTAACT AACCGCGAGC TGCGTTTTGA AAAAGAGGGG CTAGGTCAGT TAGCGAATTT TCCGCTAACC GATGCTTATA AGCTGTTTCA GCAAGGTTTA CAGGACTTGT TTGGCGTTAA GGCAACAGAT TCAAGCCTTG ATGAAATTGC TGCGGAAGAA GAGCGAATGC TTGCCAAAGC GCGGGCATCG CGCGCGCCGA CTCATTACTA CGGCGCCAGC GGTAATGTGC TGGATTACAT TTTATTGTCG GCAGACTTTG ATCCAAGCTT TGATAATAGC GTTGCCGAGG TTTGTGACTA TCACACCGAA GACAGGCACT TAGTGAACCC AAGCTTTGAG CGTGATAGCC AAAGTAGCGA CCACGCGCCG GTTACTTGCA CCTTACGCAT TAGGCGCTAA
|
Protein sequence | MANTSTKTNR VKLASFNLFN YIEPPLAYYD FENIYSAEQW QKKQSWLAEF LAQHQPDIIG FQEVFSASAL DEQMHAAGYE HFATVGEPTV IDDYICRDPV VGLGSKFPFT EVTAIEAEAE YIHALGLNPN FAFSRKPLRA TVQLPLIGLC DIYVVHFKSK RPHLDELPAA KFVQSKVTQA TNASSAALVN FGELLGRNSL GQWASSIQRG SEAALLFHAM LQRRIETNQP MILMGDFNEE LTSSVLSPLT NRELRFEKEG LGQLANFPLT DAYKLFQQGL QDLFGVKATD SSLDEIAAEE ERMLAKARAS RAPTHYYGAS GNVLDYILLS ADFDPSFDNS VAEVCDYHTE DRHLVNPSFE RDSQSSDHAP VTCTLRIRR
|
| |