Gene Spea_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0817 
Symbol 
ID5661216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1014119 
End bp1015063 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content48% 
IMG OID641235362 
Producthypothetical protein 
Protein accessionYP_001500679 
Protein GI157960645 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGGG CAAGCTTATT AACCTTGTTA GATGATATCG CGACGATTTT AGATGATGTC 
GCCGCAATGA GTAAAATTGC CGCCCGTAAA ACGGCGGGTG TGTTGGGCGA TGATTTAGCC
TTAAACGCTC AGCAGGTGTC GGGCGTTAGC GCCGATAGAG AGCTGCCTGT GGTGTGGGCG
GTTGCAGTAG GTTCATTTAA GAATAAGTGC ATCTTAGTGC CTGCGGCTAT GTTAATCAGT
GCCTTTATTC CTTGGGCGGT GACACCGCTA CTGATGTTTG GTGGCCTGTA CCTTTGCTAT
GAAGGTTTCG AAAAAATTTA CCACAGTTAT TCTGCCAACA AGCACCACCA AATCGATGAG
TCTCAGGCAA GCCCAGAGGA GATTGTCGAT CTAAAGCTAT ACGAGGCCAA TAAGGTTAAA
GGCGCGATAC GGACCGACTT TGTGTTGTCA GCGGAGATCA TCGCCATTAC CTTAGGCATT
GTGGCCGATA AGAGCTTGAG TACTCAATTT TTCACCCTAA GTGTTATCGC TATCGTGATG
ACCATAGGTG TGTATGGTTT GGTGGCTGGT ATAGTCAAAA TTGATGATGC AGGTCTGTAT
CTGAGTCAGC GTCCCGGTGA AACTCTGTGG GCGAGATTTA AGCGTCGTTT TGGTCTGATG
CTGCTTAACT CGGCGCCTTA TCTAATGAAG ACTTTATCTG TGGTGGGCAC CATAGCCATG
TTTATGGTGG GCGGCGGCAT TTTAACTCAT GGCTGGCACT GGATGGGGGC GCAGATAACG
TTGGCGGCGC AGTGGATTGA AGCATTCGAG TTTGTCGGAC CTGTGGTCGC CTTTATCACT
CCAAGTATTT TAAACGCAAT TTTTGGCGTC ATAGCCGGTG CTGTAGCGGT ATTGCTGATG
GAGCTGTTTA TTAAGCTAAA GGGCGATAAA GGCTCTGCCG AATAG
 
Protein sequence
MAGASLLTLL DDIATILDDV AAMSKIAARK TAGVLGDDLA LNAQQVSGVS ADRELPVVWA 
VAVGSFKNKC ILVPAAMLIS AFIPWAVTPL LMFGGLYLCY EGFEKIYHSY SANKHHQIDE
SQASPEEIVD LKLYEANKVK GAIRTDFVLS AEIIAITLGI VADKSLSTQF FTLSVIAIVM
TIGVYGLVAG IVKIDDAGLY LSQRPGETLW ARFKRRFGLM LLNSAPYLMK TLSVVGTIAM
FMVGGGILTH GWHWMGAQIT LAAQWIEAFE FVGPVVAFIT PSILNAIFGV IAGAVAVLLM
ELFIKLKGDK GSAE