| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0793 |
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| Symbol | |
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| ID | 5661192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 981469 |
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| End bp | 982215 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641235338 |
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| Product | putative transcriptional regulator, CadC |
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| Protein accession | YP_001500655 |
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| Protein GI | 157960621 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.790637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTTAACG TGTATATAGG TCCGTACCGA TTTGATGTCG AGCTTGGCGA GCTGATTTTT
ACTGGCTCAG AAAAAGCCTC GACATTTAAA TTATCTAATA TCGAATTTTT AGTCATAGAT
CAGTTGCTGG CGGCCAGAGG CCAGGTTGTA TCTATAGAAT CGATGTGCGA TAAGCTTTTA
CCAACGGTTG TGACCCATCA TGATATTGCA ACTGCGGTAC AAAACATTAA ACGCTTTCTT
GGTACTGAGC ATGCTAGTTG GATTGAAGTT ATTAGTAAGC AAGGTTACCT ATTGCATGTT
AAAGCACAAA ATAAGCCGAT GTTTAACTGC ACACTCAATT CATTCTCGAT TAAAAACTAT
GTACTGTGTT TAATTCTTGG GATTTTACTG ATCATTTTTC TAGCGACTAA TCTACAAACA
ACATCAGATA TTCGTTTGTC GATGCCAGAT AAAGTCAAAA TCGCAGGAAC TGACTCAATT
TTGGTTCCTA TATATGAAAA TGATGCAGAT AGAGACAAGT ACCACAGTCG GATTAAAGAG
CTATCGCAGT CGCTAGCAAG CTGTGACAAG CTTAAGTGGC AACGGGTTTA TATTGCACCA
TCGAGCGATG GTAATAGGCT TGAGTTTTTG ATGAATAACT TAGCCGATGA CGGTAAGGCT
TGTAACAATT TAAAAGTGAA TAATGTGGCT AATAATTGGC ATTTTATTGA TAGTGAATGG
TTAAAAAAGG CTGGATTCTG TGAGTAA
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| Protein sequence | MVNVYIGPYR FDVELGELIF TGSEKASTFK LSNIEFLVID QLLAARGQVV SIESMCDKLL
PTVVTHHDIA TAVQNIKRFL GTEHASWIEV ISKQGYLLHV KAQNKPMFNC TLNSFSIKNY
VLCLILGILL IIFLATNLQT TSDIRLSMPD KVKIAGTDSI LVPIYENDAD RDKYHSRIKE
LSQSLASCDK LKWQRVYIAP SSDGNRLEFL MNNLADDGKA CNNLKVNNVA NNWHFIDSEW
LKKAGFCE
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