| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0759 |
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| Symbol | |
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| ID | 5661158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 944422 |
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| End bp | 945015 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235304 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001500621 |
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| Protein GI | 157960587 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTCA TCGAGCAAGC TGCCGAGCAG GCGCATCAAC ACTTTTTGAT CTACAAGCCC
TACGGTTTTT TAAGTCAATT TGTGCCAGAG ACCCGAAAAA GTAAGCCGCT ACTTGGTCAG
CTCTATGACT TTCCCGATAA GACGATGGCT ATTGGCCGAC TCGACCATGA CTCTGAAGGC
TTGTTGCTAC TGACGACTGA TGGCATGCAG AGCCACCTCA TTCGCAGTAA AAGCATCGAA
AAAGAATATT ATGTGCAGGT TGATGGTCTT GTGAGTCAAG CGCAGCTGTT ACAGCTACAA
CAAGGGGTAG AGATCGGCAT AAGCGGTGGT AAATACCTGA CTTTACCCTG TCAGGTAGAA
CTGCTAACGA CTGAACCTAA CCTCCCCGCT CGGGGCAAGA AAATCCGAGA TCCTCGCCAC
GGGCCGACTA GCTGGCTCAG TGTCACCATA GCTGAAGGTA AAAATCGTCA AGTGCGAAAG
ATGACCGCTG CGGTGGGTTT GCCGACCTTA AGGTTAGTTA GAGTCCGAAT TGGCCATATT
TGTCTTAAAC AGATGCAGCC CGGGGAAGTG CTCCCCGTAA GCAGTTTTAT CTAA
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| Protein sequence | MSFIEQAAEQ AHQHFLIYKP YGFLSQFVPE TRKSKPLLGQ LYDFPDKTMA IGRLDHDSEG
LLLLTTDGMQ SHLIRSKSIE KEYYVQVDGL VSQAQLLQLQ QGVEIGISGG KYLTLPCQVE
LLTTEPNLPA RGKKIRDPRH GPTSWLSVTI AEGKNRQVRK MTAAVGLPTL RLVRVRIGHI
CLKQMQPGEV LPVSSFI
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