Gene Spea_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0620 
Symbol 
ID5661020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp763871 
End bp764296 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID641235166 
Productnitrate reductase cytochrome c-type subunit (NapB) 
Protein accessionYP_001500483 
Protein GI157960449 
COG category[C] Energy production and conversion 
COG ID[COG3043] Nitrate reductase cytochrome c-type subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TACTCACCTT AGCTGCGCTA GTGATGGCGC TTAGTGCTTG CTCTGGTCAG 
CAAGCGAACA CTCAAGCCGA GCCTGTTAAC ATCAGCTCAC TCGGTAAGTC TGAGATAACC
GATATTCGCG CAGCAGATCC TGCACCGCTT TATCCAAAGC GCGGTAAGTC TATCGAGCGT
ACCTTTGTAC ATCAGCCACC TATGATCCCG CATAAAGCCG ATTACCCAAT CACGCTTAAG
CGCAACGGCT GTATCAGCTG CCACAGCCCA GCAAAAGCTA AGCGTATGAA GGCAACGGCT
GTGGATCCAT CGCATATGTT GGCCGACGGC AAGCTAAACA ACGAGTACTA CAACTGTACT
CAGTGTCACA CCCCGCAAGC TGAAAACAAG CAGCACTTAG TTGAAAACGA ATTCTCAACT
AACTAA
 
Protein sequence
MKKVLTLAAL VMALSACSGQ QANTQAEPVN ISSLGKSEIT DIRAADPAPL YPKRGKSIER 
TFVHQPPMIP HKADYPITLK RNGCISCHSP AKAKRMKATA VDPSHMLADG KLNNEYYNCT
QCHTPQAENK QHLVENEFST N