Gene Spea_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0597 
Symbol 
ID5660997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp734320 
End bp735345 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content45% 
IMG OID641235143 
ProductrRNA (guanine-N(2)-)-methyltransferase 
Protein accessionYP_001500460 
Protein GI157960426 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACCA ACGCTTCGCA AGTCCTCCTC AGAAACAGTG ATTTAGTCAA AGACCAATCG 
GTATTAGTAC TCAATTATGA AAGTGATCAC CTGCCAAAAG AGTTGTTAGC AACCGCCAGC
AGCGTGTGTG GATTAGCATT AGACTATCAT CACCATCTGA TGATGCAGCC TTATGCCGCG
GCAAACCTGA CACTGCATTT TGGTCATCAG CTACCAACCG ATGAGTGTTT TGACACTGTT
ATCGTCTACT TCCCTAAGGC TAAAGCGCTA GCACCTTATC TGTTTAATCT CGCTGCTAAG
CATCTAAAAC CTCAAGGGCA ACTGATTGTT GCAGGTGAAA ACAAAGGTGG CATTAAGTCT
CTGCCTAAGC AGTTACCGAG TTATTTCGAT AAAGCTTTTA AAGTCGATAA TGCCCGTCAC
TGCATCCTAT TTACCAGTGA GCTAAATTCA CCGGCTCCAG AGTTGAAACT CAAAGACTGG
CTCAGTCGCT ACCAACTTGA TACTCCTCAA GGACAAGTGA CTATCTGTAA TTTAGTTGGC
GTGTTTAGTG AGAAGAAACT CGATGAAGGT ACGCAATTAC TACTGGCTAA TTTACCTAAG
ATGAGCGGCA ATGTGCTCGA TTTTGGTTGT GGTGCAGGGG TTATCACCGC CGCTTTACTC
AAGGCTCAGC CAGATCTTAA GCTTGAGTGT GTCGATATCA ATGCCATGGC ACTAGCCTCT
TGCGAGCTCA CCTTAGAAGC CAATGGATTT ACGGCTAAGG TCTTTGCATC CGATGGCCTA
GCGCAAACAT CTCAGCGCTA TGACGGCATT ATTTCAAATC CACCGTTTCA TGATGGTTTA
GCAAGCACCA CCAACATTGC GACTAATTTC GTAAAAGACA GTGCCAACAA CTTAAAGGCT
GGGGGGTTAT TCCACATTGT GGCTAATCGT CACCTGCCGT ACTCAGACAC CATTGCCGAA
CACTTTGGCA GTGTGAACGT GCTAGCTGAA AACAATAAAT ACAAGATTTA CTCTAACGTA
AAATAG
 
Protein sequence
MLTNASQVLL RNSDLVKDQS VLVLNYESDH LPKELLATAS SVCGLALDYH HHLMMQPYAA 
ANLTLHFGHQ LPTDECFDTV IVYFPKAKAL APYLFNLAAK HLKPQGQLIV AGENKGGIKS
LPKQLPSYFD KAFKVDNARH CILFTSELNS PAPELKLKDW LSRYQLDTPQ GQVTICNLVG
VFSEKKLDEG TQLLLANLPK MSGNVLDFGC GAGVITAALL KAQPDLKLEC VDINAMALAS
CELTLEANGF TAKVFASDGL AQTSQRYDGI ISNPPFHDGL ASTTNIATNF VKDSANNLKA
GGLFHIVANR HLPYSDTIAE HFGSVNVLAE NNKYKIYSNV K