| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0549 |
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| Symbol | |
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| ID | 5660949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 674518 |
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| End bp | 675456 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235094 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001500412 |
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| Protein GI | 157960378 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCT CTGTTCGTGC CACCCAAGCT TCTTATGTAG TGTTACCTGA AACGGTAACC
GATAAACCTA CCGTGCTTAG CTTCCTTGTG AGCCAATTTC CAGCAATAGC CGAAGCGGTT
TGGCAAAAGC GCATTGTTGA CGGTAAAGTC CATTGGCGTG ATGGCACGCT TATTACGGCT
CAAACGGCGT TTATTCCCCG CGAGCGGGTC TACTATTACC GAGAAGTGGA GCAGGAGTCA
TTAATTCCTT TCAAAGAAAA ATGCTTGTTG CAAACAGACG AGTTTCTGTT GGTATTCAAG
CCTCACTTTT TGGCGGTCAA TCCGAGCGGC AACTTCGTCA ATGAGTGTCT GGTGAATCGG
TTACGCTTAA AAACGGGTAA TCAGCAAATC GTCGCGGCTC ATCGTCTAGA CAGAGCGACG
GCGGGGGTGA TGTTACTGAG TCAGAAGAGC GAGACTCGTC ATGATTATCA CGAGTTGTTC
AAGAGTGGCC AGATCCAAAA GACCTACCAA GCGGTTGCAC CATTAAACAA TCAAATCAAG
CAAATGTTAG AGCAAGGCTC TCTGACTCTG CCTATGCATT GGACGGTGAA GAACCGGATA
AGCAAAACGA CTCCCAGTTT TAGAATGTGT ATTAGCGACG GGGAGGCGAA TAGCCACTCA
GAGATCCGTT TAATCGAGAC TTTTGGAGGC TATGGCCTGT TCGAGCTAGT CCCTGTAACG
GGGCGGACTC ATCAACTCAG AGTGCATATG ATGAGCCTTG GCATGTCTAT TCTTAATGAT
AGACTCTACC CCGAGTTACT CGATAAAGCC GCTGATGATT TTGCAAAGCC ACTCAAGTTA
ATGGCAAGGC GACTCAGTTT TACCGACCCC ATCACTGATG AAGATGTCGA TGTGAGTTGC
GACGGCTTTA ACCTACAAGA TGAAGTACAA AATCTATAA
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| Protein sequence | MSSSVRATQA SYVVLPETVT DKPTVLSFLV SQFPAIAEAV WQKRIVDGKV HWRDGTLITA
QTAFIPRERV YYYREVEQES LIPFKEKCLL QTDEFLLVFK PHFLAVNPSG NFVNECLVNR
LRLKTGNQQI VAAHRLDRAT AGVMLLSQKS ETRHDYHELF KSGQIQKTYQ AVAPLNNQIK
QMLEQGSLTL PMHWTVKNRI SKTTPSFRMC ISDGEANSHS EIRLIETFGG YGLFELVPVT
GRTHQLRVHM MSLGMSILND RLYPELLDKA ADDFAKPLKL MARRLSFTDP ITDEDVDVSC
DGFNLQDEVQ NL
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