Gene Spea_0546 details

Gene Information

• Locus tag: Spea_0546
• ID: 5660946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 671678
• End bp: 672139
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641235091
• Product: hypothetical protein
• Protein accession: YP_001500409
• Protein GI: 157960375
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2731] Beta-galactosidase, beta subunit
• TIGRFAM ID: [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGTTG ATACTTTAGC TAACCGCGAC ATCTACAAAG CCATTAATCC ACGTATTGCT 
AGCGCGCTTG AGCACCTAGC TACAACCGAT TTTAGTCAAC TAGAAATCGG CAAGTACGAA 
CTAGAAGGCA AAGATCTATT TGTGATTGTT AATGACTATC AAACACAGCC TAAAGAGCAG 
CAAGCATTTG AAGTCCACCA GCAATACATT GATGTGCAAT ACGTGGTAAG TGGTGAAGAA 
GAATTTGGTT ACCTGCCTTT GGCCAATCAG ACACCGTCTA AAGCCTATTA TGCTGAGCAT 
GATTACGCTA ACTATGACTA TGAATCAAAC AAAGATGATG CGGCATTTAT TCCACTAAAA 
GCCGGCATGT TTGCGTTATT TTTCCCGGAT GATATTCATA TGCCTGGAAC AGGCGATAAC 
GCTAGCCAAG TGCGTAAAGT GGTGATTAAG GTCAAAGTCT AA 

 

Protein sequence

MIVDTLANRD IYKAINPRIA SALEHLATTD FSQLEIGKYE LEGKDLFVIV NDYQTQPKEQ 
QAFEVHQQYI DVQYVVSGEE EFGYLPLANQ TPSKAYYAEH DYANYDYESN KDDAAFIPLK 
AGMFALFFPD DIHMPGTGDN ASQVRKVVIK VKV