| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0539 |
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| Symbol | |
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| ID | 5660939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 660602 |
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| End bp | 661948 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235084 |
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| Product | outer membrane efflux family protein, putative |
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| Protein accession | YP_001500402 |
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| Protein GI | 157960368 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ACATAATCGC TAGTCTGTTG TTAGGCCTTT TCGCTGGCTC TGCAACAGCT
AATCAAGCTA TTGCTGGTGA AGCTAATGCT AATCAAGCTA ATGTTAGCCA GGTTAATGTT
AACCAGACCA TGGCTCATGC ACAGATTGGT GCTAGCGTAA GTCAAGCAGG CCAGTTTAAC
GATTGGCTTC CACAAGTGAT GCAACGCTTT AACGGCTTAG CAGAAGTCAA AGCGCAAGCT
GCGCGTCGTC AGCAGGCATT GATGAGCATC GACGCCGCAG ACAAGGCTGT TTATAACCCA
GAGCTGGGTT TGGGCTACCA GAATGCCAGT GAAGACACCT ATAGCTTAGA CATCAACCAA
ACCATAGACT GGGGCGATAA GCGTGGCGTG GCGACACGTA TTGCGCAGCT AGAAAGTGAA
ATCTTACTCT CTAGCATTGC GCTTGAGCGC AACCAAATGT TGTCTGAGAG ACTACTGGCG
CTCACCAGTC AAAGTCAGGC GCGTAAGGCG CTAGAGTTTC AAAAGCAGCA GTTTGAAATT
GCCAAGGCTC AACTAGATAT TGCTCGTCAG CGTACCGAGG TGGGGGATAT CTCCAGTGTT
GAGCTACAAC TGATGCAACT CGATGTAGCG AGTAACGCCG CCGATTACGC ATTAGCAGAG
CAAGCATCAA TCGCCGCCGA TGGCGCGGTT TTAGCTCTAT TTGGTGAATT TGAATTGCCC
TTCGAGGATT TCGTTAACGC ACTGACGTTA CAAGCCAGTC ACATTCAAGT CTCTCCTGAG
CTCCCCGCAC TTAAGAGTGC TTATCAGCAA GTGCTGATGG CCAAGGTTAG CACCGAGCAA
GCCAAAGCCG ATGGCAGTGC AGATCCAAGT ATAAGTCTTA GCGCCGAACG TGAAGGTGAA
GAGAATAAGT TTGGTGTTGG TGTGTCTATT CCACTGCAGA TCCGCAACAA CTATAGCGAG
GCAATTGCCG TCGCTAATCA AGGCGTAGTG ATTGCCGAGC AGACCTACCT TGCTGCTGAG
CGTATCTTGC TGCAGCAACA GAAACAATTT TCGTTAAGCC TTCCAAGATT GACCCAGCGC
TACCAAGACT GGAGCGAGCT AGTACTGACC TCTGGTTCTA AGGCTGCGAG TTCATTGTCA
CAACAGTGGC AGGCAGGTGA TATCAGTACA AGCGACTATC TACAAAGCCA AAGGCAGATG
AGCGGCAGCT ATTTAGCGGG CTTAGCGCTC GAATCTGCGC TTTATGAAAG CTGGCTGAGC
TGGATGGGGG CAAGTGGACA ATTGGAAGGC TATCTCAATA GTCAATTATC GACTCAGGGC
GGCTCGGCTG CTGGACAGGT AAATTAG
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| Protein sequence | MKKNIIASLL LGLFAGSATA NQAIAGEANA NQANVSQVNV NQTMAHAQIG ASVSQAGQFN
DWLPQVMQRF NGLAEVKAQA ARRQQALMSI DAADKAVYNP ELGLGYQNAS EDTYSLDINQ
TIDWGDKRGV ATRIAQLESE ILLSSIALER NQMLSERLLA LTSQSQARKA LEFQKQQFEI
AKAQLDIARQ RTEVGDISSV ELQLMQLDVA SNAADYALAE QASIAADGAV LALFGEFELP
FEDFVNALTL QASHIQVSPE LPALKSAYQQ VLMAKVSTEQ AKADGSADPS ISLSAEREGE
ENKFGVGVSI PLQIRNNYSE AIAVANQGVV IAEQTYLAAE RILLQQQKQF SLSLPRLTQR
YQDWSELVLT SGSKAASSLS QQWQAGDIST SDYLQSQRQM SGSYLAGLAL ESALYESWLS
WMGASGQLEG YLNSQLSTQG GSAAGQVN
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