Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0529 |
Symbol | |
ID | 5660929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 653848 |
End bp | 655044 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235074 |
Product | putative plasmid transfer protein |
Protein accession | YP_001500392 |
Protein GI | 157960358 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000622443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTA AACACCTACT AGCCCCAACA ATAATTGCCA CTCTAATCTC CTTTAACTCC TATGCTGCAG TGCAATCATT CGACGCACGT TCATTCGCCA TGGGAGGCAT AGGTGCCTCG ACTGCAGATT ACCTGTCGGC GGCATTTCAT AACCCAGCCC TAACAGCAAG ATATGGTGAC AATGACGACG TAGGGGTGAT GATCCCATCG GTGGGGGCAC AATTAGATGA TAGCCAAGAG ATCATAGACA AAACTGACAA CTTCTCGGAT ATCTATGATC AGTTCAGTAG CATTCCAAAT CCGTCAGAGC AAGATGCGCA ATTGGTTATC GATGCACTAG AGGAGCTACA AGGCAACCGC GCGAATGTAC AAGCGAGTGT CAACATTGCT GTCGCTATTC CGAATCAATA TGTCTCAGTA AATATGTTTG TCAAAGCTTA CGCTGACGCC TTCGTGTTCG CCGATATTGC CGAAGACGAT CTTAATGCTG ATAAACTCAT TGAGAATGGC TCACTCACAT CGCAGGCACT GACGATGGGA GTGTTAATCG CTGAAACCGG TGTCAGCCTC GCCAAGTCAT ATCAAATGGG TCACGGCACC TTCTATTACG GTATCACCCC AAAATACCAG CAGGTCACTA CGATTAACTA TGTTACCGAT ATTGAAAACT ACGAGTTTGA TGATTGGGAT GATGATCAAT ACCAAAGCGA AGAAAGCAAC TTCAATCTAG ACGTGGGCTT GACCTACCAT ATGAATAACG GTCTTGCCTT TGCACTTGTT GGTAAAAATT TGATTGAAAA TAGCTACGAT ACGACACTGA CCAAAGGCAT TCATGGCCAG TACTCTATCA GCCCGACCTA CGTCGCAAGT GCCAGCTATA ATCACCGCCT GTTCACCCTC GGGTTTGATA TCGATCTAAA CGAAACTGAG GGCTACGAGT CTATCGAGGG AACATTAAAC GGTATAAATA GCAACACAGA CAATAAGCAG ATGGCAGGTA TTGGTATCGA GTTTAACGCC TTCGATTGGG CACAGCTAAG GGCAGGCTAC CAAACCGATC TATCAGACAA TCTCGCCGAT CAATTTACCG CAGGTTTTGG ACTATCGCCT TTTGATACCT TCCGTATCGA CCTGTCGGCA AGTTACGCCA GTGATAACGA GTTAGGCGCA GTGCTACAAA CCTCACTAAC CTTCTAG
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Protein sequence | MKRKHLLAPT IIATLISFNS YAAVQSFDAR SFAMGGIGAS TADYLSAAFH NPALTARYGD NDDVGVMIPS VGAQLDDSQE IIDKTDNFSD IYDQFSSIPN PSEQDAQLVI DALEELQGNR ANVQASVNIA VAIPNQYVSV NMFVKAYADA FVFADIAEDD LNADKLIENG SLTSQALTMG VLIAETGVSL AKSYQMGHGT FYYGITPKYQ QVTTINYVTD IENYEFDDWD DDQYQSEESN FNLDVGLTYH MNNGLAFALV GKNLIENSYD TTLTKGIHGQ YSISPTYVAS ASYNHRLFTL GFDIDLNETE GYESIEGTLN GINSNTDNKQ MAGIGIEFNA FDWAQLRAGY QTDLSDNLAD QFTAGFGLSP FDTFRIDLSA SYASDNELGA VLQTSLTF
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