| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0448 |
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| Symbol | |
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| ID | 5660848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 556787 |
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| End bp | 557707 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234986 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500311 |
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| Protein GI | 157960277 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCATC TAAGGCATAT GGCGATATTT AAACAGATAG TCGATAGTGG CTCTATCAGT
GCTGCTGCAG ATAAACTCGA TCTGTCTAAG TCTGTTGTCA GTCATCACCT TAAGTCTTTA
GAACTCGCTG TGGGTGTACA GCTGCTGCAT AGAACCACCC GCAGGCAGCA ACTCACTCCG
GCAGGTAAAG ACTTTTATCA GCGCTGCCGT GAACTTGGCG ATATATCCGC CCTCGCCTGG
CAACAGGCAA GAGAAGCGGC TGATAAGTTG GCAGGGCCTA TTAAGATAAG TTCCCCCCAC
GCCTTGGTTG ATAGCATCAT AGCGCCAGCT ATTGCCAGCC TTTGCACTAA TAACCCTATG
ATAAGACCAC ATATTCAAAT GCAAGATCGC CGTATCGATC TGCTTGGGCA AGATATTGAT
CTCGCGGTGC GTGTAGGTAA ATTGGCATCC AGTAGTTTAA TACAGCGCAA AGTGGGACAA
TTTAGGGACG TGCTTTGTGC CAGCCCAGTC TTTATCAAAC AAAATACAAG ATTGATAAAA
GCGGAGGATT GGGTTTCACT GGATTACATA GCCAACTCTT GGCAAGGGCA AAGTATCCAG
CACTCGCTAC AATCAAAAGC CAGTTCAAAA GGCAATGCAA AAGCACCGAA CGAGTTAAGC
TTAAACTTCA ACGCTAATCG TTATGCAGAC ACCTCATCTG CGGTGCTTTC CTTGGCTAAA
GCTGGCTTAG GTATCGCGTT ATTACCCGAC TTTGTGTTTG AGCAAGAGCC ATTACTCGTT
GAGTTATTAC CGACGCACCA ATGCCCACTA AATAATGTTT ATGCACTGCA TGACTTTGGC
CGCACCCCGC CACTTCTTAT CAAAAAAACC ATCGATGCAC TGCTTGATTC TTTTCTGTTT
CAAGGACAAA CCGCTCGCTA A
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| Protein sequence | MDHLRHMAIF KQIVDSGSIS AAADKLDLSK SVVSHHLKSL ELAVGVQLLH RTTRRQQLTP
AGKDFYQRCR ELGDISALAW QQAREAADKL AGPIKISSPH ALVDSIIAPA IASLCTNNPM
IRPHIQMQDR RIDLLGQDID LAVRVGKLAS SSLIQRKVGQ FRDVLCASPV FIKQNTRLIK
AEDWVSLDYI ANSWQGQSIQ HSLQSKASSK GNAKAPNELS LNFNANRYAD TSSAVLSLAK
AGLGIALLPD FVFEQEPLLV ELLPTHQCPL NNVYALHDFG RTPPLLIKKT IDALLDSFLF
QGQTAR
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