Gene Spea_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0440 
Symbol 
ID5660840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp547516 
End bp548160 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID641234977 
Productformate dehydrogenase, gamma subunit 
Protein accessionYP_001500303 
Protein GI157960269 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAGC AGAATATGAT TTTGCGCCAT AAGTTGTTCG ACCGCATCTG TCACTGGTTT 
GTGGTTGCAA CGGGTTTGGT GACATTCCTA ACCGGCTTTG CTTTCTTCTT CCCATCATTT 
CAATGGTTGG GGTCGATTGC AGGTACGCCG CAAATGGCGC GCTTTGTTCA CCCTATTGCC 
GGCTTGATGA TGTGTCTGCC GTTAATGGTG ATGTTGGTGC GTTATTACCA CCATAACAAG 
TGGGAAAAGA ATGACCTGAC ATGGATGTTA GCTATCAAGG ACGTGATGTT CGAGAACGAG 
GACAAAATCC CCGCCATCGG CCATTACAAC CCGGGTCAAA AAGTGCTGTT CCGCACCTTC 
GTGGTGACCT CAATCGCATT GACGATTACT GGCATCATGA TGTGGCAGCC TTACTTTGCC 
CCTTATTTTG AAGCAAGCGC CATTCAGTGG GCCATTTTGA TCCACGCAAT CTGTGCTGTG 
ATCATGTTGA TCTTCGTGAT TGTGCACTTT TGGATGGCAA CGTGGGTAGA AGGATCGGTT 
GCTGGCATGT TGTACGGCTA TGTGTCGCGG GCTTGGTGCA AGAAGCATCA CCCTAACATG 
CTAAACGATC CTGAATTAAA GACTAATAAG CAGGAAAAAC ACTAA
 
Protein sequence
MHKQNMILRH KLFDRICHWF VVATGLVTFL TGFAFFFPSF QWLGSIAGTP QMARFVHPIA 
GLMMCLPLMV MLVRYYHHNK WEKNDLTWML AIKDVMFENE DKIPAIGHYN PGQKVLFRTF 
VVTSIALTIT GIMMWQPYFA PYFEASAIQW AILIHAICAV IMLIFVIVHF WMATWVEGSV 
AGMLYGYVSR AWCKKHHPNM LNDPELKTNK QEKH