Gene Spea_0364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0364 
Symbol 
ID5660764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp420184 
End bp420789 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID641234898 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001500227 
Protein GI157960193 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TACTAGTTCT ATTAAGTCTC GCGATTTTAG GTGGCTGCTC AATGCGTGAT 
ATTGCCACCA TGGATGAGCC AACGGTACAG GTTAACGATC TAAGCGATAT CGATCATGAT
GGTGTGATTG TAGCAAGAGA GCGCTGTAAC GAAACTGCGC TTGGAGCAAC TATCGATAAC
TATGGTTGCG GTAAAATCAA GCCAATTAAT GAGCGTCAGG AGCTCAAGAT CCTGTTTGCT
AATGACTCTT ACTATATCGA TCCTCAGTAT TATCCGCAGG TAGAAGTGAT CGCAAGCTTT
ATGCAGAAGT TCCCTAATAC CCAAGCGGTT ATTGAGGGCC ACTGTAGTAA AACGGGATCA
CACCAACATA ACCAAGTCCT GTCTCAAAAT CGTGCCAATG CAGTCAGCTC TCTACTTGCT
GAACGTTTTG GTATTGATTC AGGTAGACTC AGTGCAGTAG GTTATAGCTT CGATCGTCCT
ATCGATCCGA CTCATACCGC ATCAGCACAT AAGATAAACC GTCGAGTCAT CGCTGAACTC
ACTGGCGACG ACACCACTGC GGATATGAAG TGGCACATCT ACACGGTAGA CGAAGAAGTT
AAATAG
 
Protein sequence
MKIILVLLSL AILGGCSMRD IATMDEPTVQ VNDLSDIDHD GVIVARERCN ETALGATIDN 
YGCGKIKPIN ERQELKILFA NDSYYIDPQY YPQVEVIASF MQKFPNTQAV IEGHCSKTGS
HQHNQVLSQN RANAVSSLLA ERFGIDSGRL SAVGYSFDRP IDPTHTASAH KINRRVIAEL
TGDDTTADMK WHIYTVDEEV K